Larimichthys crocea (large yellow croaker): 104922822
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Entry
104922822 CDS
T04659
Symbol
ttc37
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104922822 (ttc37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lco03019
]
104922822 (ttc37)
Messenger RNA biogenesis [BR:
lco03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
104922822 (ttc37)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_16
TPR_14
TPR_19
TPR_11
TPR_17
TPR_8
TPR_CcmH_CycH
TPR_12
TPR_9
ANAPC3
HAT_Syf1_CNRKL1_N
ARM_TT21_C
Fis1_TPR_C
PknG_TPR
TPR_COPA_B
TPR_Slam
TPR_7
Loricrin
Motif
Other DBs
NCBI-GeneID:
104922822
NCBI-ProteinID:
XP_019131488
LinkDB
All DBs
Position
III:5415112..5427688
Genome browser
AA seq
1569 aa
AA seq
DB search
MSSKEVKSALKSAREAIKNKEFKEALKHCKAVLKLEKSNYNAWVFIGLAAGELDQPDQAQ
TAYKKAVELEPEQLLAWQGLANLYEKIDQWDFKVELPNVYQKLVELYASSDKNKCYEMIK
KLSDIYQSDKEYLKLAKIWLQLLQLKEEEAVDKKELLQLWQQMTKLLSDCLGEEEPDNET
QQHLITAFEKAMVLMDPVPGEEHKKVSADYVKCLSKLPQEEAKLKEACESMLSLYPNQSY
PLEVLCSHYLKTGVQNEDAVSCFSRLLNLVPDSGLGHLGLGTKALQEGRYKDAIKDLAQG
LKKMSSATGWYSLAEAQFKMHRYSDSAISCSQGLTVCVSGEKELRVKLLRLRLEALVGSG
GEKAADQALETFSQIPDADKDPALVALKGRAYLNKGEADQALKVSSELVASYPNMAQGFV
LRGQTQLAQGQQQLAEESFLNAVSQSPDSGEYYFLLGQLYWDMGEETRKDRSKAHTHLLK
AAKLDPNLGCAFRYLGHYYREVANDRGRARGCYKKAFELDNDDAESGAASVDLCMEHDDM
DAALATLQSVIEKATPGSAKWAWMRRGLYHLKVGEHQQATADLQAALRADPEDWVCWECL
GEAYLNRRSFTAALKAFGKAHQLQPSSIYSVYQAAAIKQTLGKFKEAVAEYLQITAKQDY
VPALKGLGECQLSLAKSLMEDCRDGSAIDLIQQAIQNLFRAVELRPDLSCLWKLLGDACT
AVRTVSPNRAQVVVPALLAGLDPNTQSHTLNQAQTLKVGERCYVRALKLMSEVPSLWYDL
GLNYYHQSNLPCPAEADQNSLSLLLEKAQECLKKAIMMESGNYSYWNALGVISMSKGLEN
FALAQHCFIKSIQVETNNVVAWTNLGTLYLKKDNIELAHEAFKIAQSLEPLYVNCWIGQA
LIAERVGSYDTMDLFRHTTELSTHMEGVKGYAYWVCSTLLDKSNRDSELYRYNIVQMNAI
SAAQVALSKYTERIQSDPDAFIMLGYLNEHLQLKRQALQAYQRAVELLQSMSSTEELAFA
LGSYGRALCTSGQWDEAVRVYTATPLQELSDLTGLALAYCRARLIPESISAYERALAVAS
SEKEKAYILTALALLQHRQGNLDSAKTLLFKCSMLKEPIPESLLCLCALGLVHSDATLAA
AALTELLKQGSASGDVIEQRCLLTCALLALQGNYSAIQREASRAVHSNPGNPSLWALLSR
LIPQYYPKKANGGAVAGHVACLSSMTQGKRALLYSGVNQLAGGRHSGEDSHKNALKTMQR
AVLLCPDDPATWAGLMAACHTENTSCYLSGSAPCRQGLEHILMSVVSDKVRIAEEIERPL
AQTLEAWVLQQAVSGLMLGGQLEQAEALCSQVLNVSPEHPAVLLSLRQVQCQRLLVASGG
TVLPDSVLEQLNNTVMVNPTNLGAWHWLAEVYRSQGLLVQAVMAYRQSLQVASQLGMHSS
QVASLLRLALLALGPCMARVPGNDWADLIQEATTEVLKLGSSPTALLFQALLQFVTKMAA
RETRRLLERLIYVPSQDFPVTVVQVASWYLLRHLHAKNDQELIDVLLQHAKVNGDQRLLK
FHSLLASSS
NT seq
4710 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtaaggaagtgaagtctgctctgaaaagtgccagagaggccatcaagaataaa
gagttcaaagaagcactgaagcattgcaaggctgttttgaaacttgagaagagtaattac
aatgcatgggtgttcatcggcctggcagccggggagcttgaccagcctgatcaggcacag
acggcttataaaaaggccgtggagctggagccggagcagctgctggcatggcagggtttg
gcaaatctttacgagaagatcgatcagtgggatttcaaagttgagctgcctaacgtctac
cagaagcttgttgagctgtatgcaagctccgacaagaataaatgttatgagatgatcaaa
aagctgtctgatatctatcagtccgacaaagaatatttaaagttggcaaagatttggctg
caactccttcagctgaaggaggaagaggctgtggacaagaaggagttactgcagctatgg
caacagatgaccaaactcctgtcagactgcctcggggaggaagagccggacaatgaaact
caacagcatttaatcacagcatttgagaaggccatggttctcatggatcctgtaccagga
gaggaacacaagaaggtctcagccgactacgttaaatgtctttctaaacttccacaagaa
gaagccaaattgaaagaggcatgtgagtccatgctgtccctctatcccaaccagagttat
cctcttgaagtcctttgttctcactacctcaaaactggtgttcagaatgaagacgcagtc
agctgtttctcccggctcctgaatctggtccctgacagtgggttaggtcacttgggtctg
ggcaccaaagcactgcaggaagggaggtataaagatgccattaaggatcttgcacaaggg
ttaaagaaaatgagctccgctacaggatggtacagtctggctgaagcacagtttaaaatg
cacagatactcagatagtgctatatcatgctcccaaggtctcacggtttgtgtttccgga
gagaaggagctgagggtcaaactgcttaggctgaggctagaggctttagtcgggagtgga
ggagagaaagctgcagaccaggctttggagacattttcacagatcccagatgctgacaaa
gacccggctctagttgctcttaaaggacgtgcatatcttaacaagggagaagctgatcaa
gcacttaaggtgtcttcagagctggtggcctcttaccctaacatggctcagggctttgta
ctgagaggacagacacaactggctcagggccagcagcagctggcagaggagagtttccta
aacgcggttagccaaagcccagacagtggagagtattatttcttgttgggacaactctac
tgggatatgggagaagagactcgtaaggaccggagcaaagcgcacacacatttgctcaag
gctgcaaagttagacccaaacctcggttgtgctttccgctaccttggacattattaccgg
gaggtggcaaacgatcgtggccgggcacgaggctgctataagaaggccttcgagttggac
aatgatgatgctgagtctggagctgcctcagtggatctctgtatggagcacgacgatatg
gacgctgccctggccacacttcagtcagtgattgagaaagccactccaggctcagctaaa
tgggcttggatgagacgtgggctttaccacctgaaggtcggagagcatcaacaagctaca
gctgatctgcaggcagctctgagagcagacccagaggactgggtgtgttgggaatgttta
ggtgaggcctacttgaaccgcaggagcttcacagcagctctgaaggcctttggtaaggcc
catcagcttcagccctcctccatctacagtgtctaccaggccgctgccatcaaacagacc
ctgggcaagttcaaggaggcagtcgctgagtacttgcagatcacagcgaagcaggactat
gttcctgcccttaaaggtcttggagagtgccagttgtctctggcaaaaagtctaatggaa
gactgcagagatgggagtgccatcgacctcatccagcaagccatacagaacctcttcaga
gctgtggagctgcgtccagatctgtcttgtttgtggaagttgctgggagacgcttgcacc
gcagtccgcaccgtgtcgccaaacagagcccaggtcgtcgtgcccgccctgctggctggt
ttagatcccaacacccagagccacacgctgaaccaggcccagacacttaaagtcggggag
aggtgttatgtccgtgctttgaaactaatgtctgaggtccccagtctttggtatgaccta
ggactaaactactaccaccagtccaacctaccctgccccgcagaggcagaccaaaactcc
ctgtctctgctcctagagaaggcccaggagtgtttaaaaaaggccatcatgatggaaagt
gggaactatagctactggaatgctttaggagtgatttcaatgagcaaaggtcttgagaac
tttgctctggctcaacactgcttcatcaagtccatccaagttgaaacgaataacgtcgtc
gcttggaccaacctcggtaccctgtatttgaagaaagacaatatcgagcttgcacacgag
gcctttaagatcgcccagtctctggagccactttatgtcaactgctggatcggacaggcg
ctgatcgcggagagagtgggaagctacgacaccatggatcttttcaggcacaccaccgaa
ctcagcacacatatggagggagtgaaaggttatgcctactgggtgtgttccaccctgctg
gataaaagcaacagagactctgaactttaccgctacaacatagtccagatgaatgccatc
tctgccgctcaggtggcactcagcaagtacacagagaggatccagtctgacccagacgcc
ttcatcatgcttggctacctgaatgagcatctgcagctgaagaggcaggccctgcaggct
tatcaaagagctgttgaactccttcagtccatgtcctccacagaggagctggcgttcgct
ctgggcagctacggccgtgctttgtgcacctcgggccagtgggacgaggcagtgcgcgtt
tatactgcaactccgctgcaggagctcagtgatctgacggggctggctctggcctactgc
agggcaagactcatcccagagagcatcagcgcctatgagcgtgccttggctgtggcttca
agcgagaaggagaaggcttacatcctaacagctctggccctgcttcagcaccggcagggt
aacctagactcagccaagactctgctgtttaaatgctcgatgttaaaggagccaattcca
gagtctctgctgtgtctgtgtgccctgggactggtccacagcgatgccacattagctgct
gctgccctgactgagctgctgaagcaaggttcagcctctggagatgttatagaacagcga
tgtctactcacctgcgctttgctggccctgcagggcaactacagcgcgattcaaagagag
gcatccagagctgtacacagtaaccctggaaacccgtctctgtgggccctgctgtccaga
ctgataccacagtactaccccaagaaagcaaatggtggagcggtggccggtcatgttgcc
tgtctctccagtatgacccaaggaaagagggcgctgttgtacagtggagtgaaccagctg
gctggcgggagacactcgggagaggacagtcacaagaacgcactgaagactatgcagaga
gctgtgctgctctgtcctgatgatccagcaacctgggcaggattaatggctgcctgtcac
accgaaaacacttcctgttatctctcaggctctgctccttgcagacaaggactggagcac
atcctcatgtcagtggtttctgacaaagtgcgtattgcggaggagatagaacgccccctg
gcccagactctagaggcctgggtgctgcaacaggcagtgagtggtctcatgctgggcgga
cagctggagcaggcagaagccctctgctcacaggtgctcaatgtttctccagaacaccca
gcggtgctgctgtctctgagacaggtccagtgtcagcgcctccttgttgccagtggtggt
actgtcctcccggactctgtgctggagcaacttaacaacacagtgatggtgaaccccacc
aaccttggggcgtggcattggctggccgaggtgtatcgtagccaaggcctgctggtccag
gcagttatggcttaccggcagagtctgcaggtggcttcacagctcggcatgcacagcagc
caggtagccagcctcctccgactagccctgctagccctaggaccatgtatggcacgtgtc
ccaggaaacgactgggcggacctgatacaagaagccaccacggaggtcttgaagctgggt
tcatcccctacggctctccttttccaggccctgctccagtttgtgaccaagatggctgct
agggaaacgaggcgtttgttggagaggctgatatacgtcccctctcaagacttcccagtg
actgtggtgcaggtggccagctggtacctcctcaggcacttgcatgccaaaaacgaccag
gagctaattgatgtcctattgcaacatgccaaagtgaacggagatcagagactgctgaag
tttcattctctgctcgcctcttcatcctga
DBGET
integrated database retrieval system
