Larimichthys crocea (large yellow croaker): 104923310
Help
Entry
104923310 CDS
T04659
Name
(RefSeq) short transient receptor potential channel 4 isoform X1
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lco04040
]
104923310
Ion channels [BR:
lco04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
104923310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_4
Ank_5
PKD_channel
YVC1_C
Motif
Other DBs
NCBI-GeneID:
104923310
NCBI-ProteinID:
XP_019114910
LinkDB
All DBs
Position
VII:22821227..22902631
Genome browser
AA seq
864 aa
AA seq
DB search
MVAAMSQLYYKKAENSSYRDRIPLRIVRAESELSPMERAYLGAVEKGDYASVKQALEEAE
IYFRININCIDPLGRTALLIAIENENLEIIELLLSYNVYVGDALLHAIRKEVVGAVELLL
NHKKPRGEKQVPPILLDKQFSDFTPDITPIILAAHTNNYEIIKLLLQRGVSIPQPHAVRC
NCVECVSSSDVDGLRHSRSRINIYKALASPSLIALSSEDPFLTAFQLSWELKELSTVENE
FKAEYEELSHVCKQFAKDLLDQTRSSRELEIILNYRDDINPLLDENANDLARLKLAIKYC
QKEFVAQPNCQQLLASRWYDEFPGWRRRHWAGKLITCIFIGLLFPLLSIFYLISPKSRYG
LFIRKPFIKFICHTASYLTFLFLLLLASQHIAAAKPDLQGPPPTTVEWMILPWVLGFIWT
EIKQMWDSGFQDYIDDWWNLMDFIMNSLYLATISLKIVAYAKYSQDKLRCNWEMWHPTLV
AEALFAIANIFSSLRLICLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQ
LYFYYETKDGNTCTGIRCSHQNNAFSTMFETLQSLFWSVFGLISLYVTNVEPNHEFTEFV
GSTMFGTYNVISLVVLLNMLIAMMNNSYQHIADHADIEWKFARTKLWMSYFEEGGTLPSP
FNIIPSPKTIYYLFGWIKTQLFKSNRKRLENFETLGRRAADNVRLNHEYQEVLRNLMKRY
VAAMIRDAKTEEGLTEENFKELKQDISSFRYEVLGMMRAKPHGGVTSQVASSTMAYPGNP
FKYSPKFPAEQPQHKLSVLDVSGSANATSTNRQASGSLVQNQELQTKNVIVEVFQKVEED
IQEIEHSCIEQDKEVTNGPKKYKN
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atggtagcagcaatgtcacagctctactacaagaaagcggagaactcctcatacagggat
cgcatccctctgcgaattgtgcgagccgaatctgagctttcacccatggagagggcctac
ctgggggctgttgagaagggggactatgccagtgtgaaacaagccctggaggaggctgag
atctacttcaggatcaacatcaactgcatcgaccccctggggcgcacagccctgctcatt
gccattgaaaatgagaacctggagatcattgagcttctcctcagttataatgtatatgtg
ggtgatgccctactacatgccatccgcaaagaagtggtgggggctgtggagctgctgctc
aaccacaagaagccacgcggggaaaaacaggttccaccaattctgctggacaaacagttt
tcagacttcaccccagacatcactccaattatccttgcagcccacaccaacaactatgag
atcatcaaactgcttttgcagcgaggtgtttccatacctcagccacacgctgtgcgttgc
aattgtgtggagtgtgtgtccagttcagatgtcgacggcctgcgtcactcacgctctcgt
atcaacatctacaaggcccttgccagcccgtcgctcatcgccctctccagcgaggatcct
ttcctcacagcttttcagctcagctgggagctgaaggagctcagcacagtggagaatgag
ttcaaggcagagtatgaggagttgtcccatgtgtgtaaacaatttgcaaaggacctcttg
gaccagaccagaagctccagagagttggaaataatcctcaactaccgtgatgacatcaac
cctctgctggatgagaatgctaatgatctagctcgactgaagctggctatcaaatactgc
cagaaagagtttgttgctcagccaaactgtcagcagctgctggcgtctcggtggtatgat
gagttcccaggctggagaaggcgtcactgggcaggaaagctcatcacatgtatcttcatt
ggcctcctcttcccactgttatccatcttctacctgatctctccaaagagccgctatggc
ttattcatccgtaagcccttcatcaagttcatctgtcacactgcttcctacctgaccttc
ctctttctgctcctcttggcctcgcagcatatagctgctgcaaaaccggaccttcagggc
ccgccacccactaccgtggaatggatgatcctgccatgggtgcttggctttatctggact
gagatcaaacagatgtgggatagtggtttccaagactacatagatgactggtggaactta
atggactttataatgaactccctgtatcttgcaaccatttcactgaagattgttgcctat
gcaaagtacagtcaggacaaactcagatgtaactgggaaatgtggcacccgactttagtg
gcagaggcattgttcgccatcgccaacatcttcagctccctgcgcctcatctgccttttc
actgccaactcccatctaggccccttacagatctcactgggtcgcatgcttctggacatc
ctcaagttcctcttcatctactgcttagtgttgttagcctttgccaatggcctcaaccag
ctctacttttattatgaaacgaaggatggcaatacttgcacgggtattcgctgcagccac
caaaacaacgccttctcaacgatgttcgagacactgcaatcattattttggtctgtattt
ggcctgatttcgctctatgtgaccaatgtggaaccaaatcatgaattcacagagtttgtg
ggcagtaccatgtttggcacgtacaatgtaatctccctagtagtccttcttaacatgcta
attgcaatgatgaacaactcctaccagcacattgctgatcatgcagatatagagtggaaa
tttgcaagaacaaaattatggatgagctattttgaagaaggcgggactttgccatctcca
ttcaacataatacccagtccaaagactatttattatctatttggatggataaagacgcaa
ctgtttaaatcaaacagaaaaaggcttgaaaactttgaaactttggggagacgtgcagct
gataatgtaaggttaaatcatgagtatcaggaggttttgaggaacctcatgaagcggtat
gtggctgcaatgatcagggatgccaagacagaggaaggtttgacagaggaaaattttaag
gagcttaaacaggatatctccagcttccgctatgaagtcctgggaatgatgagggccaaa
cctcatggtggggtcacaagtcaggtcgcaagttccaccatggcttacccgggaaaccca
ttcaaatattcaccaaaattccccgctgagcagccgcaacacaagctgagtgtgttagat
gtgagtggatctgctaatgccaccagcaccaataggcaagccagtggttcacttgttcaa
aaccaagaacttcagacaaagaatgtgatcgtggaagtctttcagaaagtggaggaggac
attcaggagattgaacattcttgcatagagcaggacaaggaagtgacaaatgggccaaaa
aaatataaaaattaa
DBGET
integrated database retrieval system
