Larimichthys crocea (large yellow croaker): 104923373
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Entry
104923373 CDS
T04659
Symbol
rab40c
Name
(RefSeq) ras-related protein Rab-40C
KO
K07928
Ras-related protein Rab-40
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lco04121
]
104923373 (rab40c)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
lco04031
]
104923373 (rab40c)
Ubiquitin system [BR:
lco04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul5 complex
Target recognizing subunit
104923373 (rab40c)
GTP-binding proteins [BR:
lco04031
]
Small (monomeric) G-proteins
Rab Family
Rab40
104923373 (rab40c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
SOCS_box
Arf
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
104923373
NCBI-ProteinID:
XP_010734744
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Position
XII:31244112..31259672
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AA seq
279 aa
AA seq
DB search
MGSQGSPVKSYDYLLKFLLVGDSDVGKGEILDSLQDGSAESPYAYSSGIDYKTTTILLDG
RRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIREIDEHAPGVP
RILVGNRLHLAFKRQVPTEQARAYAEKNGMTFFEVSPLCNFNVIESFTELSRIVLMRHGM
EKFWRPNRVFSLQDLCCRAIVSCTPVHLIDKLPLPVAIKSHLKSFSMANGMNAVMMHGRS
YSLANPAGGSKGNSLKRSKSIRPPQSPPQNCTRNNCKIS
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgggcagccagggcagcccagtgaaaagctatgactacctgctcaagttcctcctggtg
ggagacagcgatgtgggcaaaggggagatcctggacagcctgcaggatggatcggccgag
tccccgtacgcttacagtagtggtatcgactataaaaccaccaccatccttctggacggg
cggagagtgaagctggagctttgggacacctcaggtcaggggaggttctgcaccatcttt
cgctcgtattcccgcggggctcaggggatcctgctcgtgtacgacatcaccaaccgctgg
tccttcgatggaattgacaggtggatcagagagattgatgagcatgctccaggcgtgcct
cgaatcctcgttggtaaccgcctacatctggccttcaaacgccaagttcccactgagcag
gcgagggcgtacgccgagaagaacggcatgaccttcttcgaggtgagccctctgtgcaac
ttcaacgtcattgagtccttcacggagctgtcgcggatcgtcctgatgaggcacggcatg
gagaagttctggaggcccaacagagtgttcagcctccaggacctctgctgtagagccatc
gtgtcgtgcacgccggtccacctcatcgataagctcccactgcctgttgccatcaaatcc
cacctcaagtccttctccatggccaatggcatgaacgccgtcatgatgcacggacgctcg
tactcgctggcaaacccagccggcggctccaaaggcaacagcttgaagcgctccaagtcc
atccgtccgccgcagagcccgccgcagaactgcacccgcaacaactgtaagatctcctaa
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