Larimichthys crocea (large yellow croaker): 104925234
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Entry
104925234 CDS
T04659
Name
(RefSeq) transcription factor EB isoform X1
KO
K15590
transcription factor EB
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04020
Calcium signaling pathway
lco04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
104925234
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
104925234
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lco03000
]
104925234
Transcription factors [BR:
lco03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
104925234
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Gene cluster
GFIT
Motif
Pfam:
MITF_TFEB_C_3_N
DUF3371
HLH
Motif
Other DBs
NCBI-GeneID:
104925234
NCBI-ProteinID:
XP_019112413
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Position
VI:complement(19169741..19198117)
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AA seq
524 aa
AA seq
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MASRIGLRMQLMRDQLQQEEQRERQQQQQLQQQQQNAALQYMQHRMAGPPAPTPAISTPQ
HYQSMQVPVEVLKVQTHLENPTDYHIRQSQKQQLKEYLSTTYATKQTVHAVAGLVPLSSP
TNMGPTGGSASAPPPMHSPHMRTEQLMSGNSAPNSPMAMLNIGSSHEKEMDEVIDDIISM
QSNYDDIQGYIDSVQMPNTLPLSSSHLDVYTGPGMKGPPVAMTSNSCPANLTIKRELSDA
EARALAKERQKKDNHNLIERRRRFNINDRIKELGTMIPKTNDLVHSDVRWNKGTILRASV
EYIKRMQKDVQRTREVENNFKRMEMANKHLMLRIQELEMQARLHGLPSNSPSGLNPNEMM
AYIKQETSPEENLSHPQAQAHHQAQHLTQNQAHPQAQQHHFLPQTHLHHQGQAQPQPSQL
PPLPHHLQPQPPIQFPSVGSSQPFDFAQSLDLCDGMSGFSDGMPGLGDLSGLDVQGRRGD
LGFLMMDEPLSPMGGDPLLSAMSPEASVDSSRRSSFSIEDGDIL
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggcctcacgcatcgggctgcggatgcagctgatgcgagaccagctgcagcaagaggag
cagcgtgagaggcagcagcagcagcagctacagcaacagcagcagaatgcagccctgcag
tacatgcagcatcgcatggctgggccaccggcacccaccccggccattagcaccccacag
cattaccaaagcatgcaggtccccgtggaggttctcaaggtacagacccaccttgagaat
cctacagactaccacatccgtcagtctcagaagcaacagttgaaagaatacctgtccacc
acctatgccaccaaacagacggtccacgcagtagcaggactggtgccgctctcttctccc
acaaacatgggacctacagggggttcagcgtctgccccgccacccatgcactccccacac
atgcgcacggagcagctcatgtctggaaacagcgcccccaacagccccatggcaatgctc
aacattggctcgagccacgagaaagagatggatgaggtcattgatgacatcatcagcatg
cagtccaattacgatgacattcaaggatacattgactcagtccagatgccaaacacactt
cccctgtccagcagtcacctggatgtgtacacaggccctggtatgaaggggccacctgtt
gctatgaccagtaactcctgtcctgctaatctgaccatcaaacgagaactgtcagatgca
gaagcccgtgcgctggccaaggagagacagaagaaagacaaccacaatctgattgaaagg
aggaggagattcaacatcaatgatcgtatcaaagagctgggcaccatgatccccaaaacc
aatgaccttgtgcacagtgacgtgcgctggaacaaaggcactatactgagggcgtctgta
gagtacatcaaacgcatgcagaaggatgtgcagaggaccagagaggtggaaaacaacttc
aaaaggatggagatggctaacaagcacctgatgctacgcatccaggagctggagatgcag
gctcgtctgcacggcctgcccagcaactctccctctggtctgaacccgaatgaaatgatg
gcttacataaaacaagagacgagcccagaggagaacctctctcaccctcaggcacaagcc
caccaccaggcccagcacttaacccagaaccaggctcatccccaggcccagcagcaccat
ttcctcccacagacccacctccaccaccagggccaggctcagcctcagcccagccagctg
ccaccgctcccccaccacctgcagccccagccacccatccagttcccatctgtaggcagt
tcccagccctttgactttgcccagtcgctggacttgtgtgatgggatgtccggcttctca
gacggcatgccggggctaggcgacctgagtggactggatgtccaggggaggaggggagat
ctgggcttcctgatgatggacgagcccttgtcccctatgggcggagacccgctgctctct
gcaatgtctcccgaagcctcggtcgactccagccgcagatccagcttcagtatagaggac
ggagacatattgtag
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