Larimichthys crocea (large yellow croaker): 104925464
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Entry
104925464 CDS
T04659
Name
(RefSeq) G-box-binding factor
KO
K17386
platelet-derived growth factor subunit B
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04010
MAPK signaling pathway
lco04020
Calcium signaling pathway
lco04510
Focal adhesion
lco04540
Gap junction
lco04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
104925464
04020 Calcium signaling pathway
104925464
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104925464
04540 Gap junction
104925464
09142 Cell motility
04810 Regulation of actin cytoskeleton
104925464
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
lco04052
]
104925464
00536 Glycosaminoglycan binding proteins [BR:
lco00536
]
104925464
Cytokines and neuropeptides [BR:
lco04052
]
Cytokines
Growth factors (RTK binding)
104925464
Glycosaminoglycan binding proteins [BR:
lco00536
]
Heparan sulfate / Heparin
Growth factors/receptors
104925464
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF
PDGF_N
Motif
Other DBs
NCBI-GeneID:
104925464
NCBI-ProteinID:
XP_019109359
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All DBs
Position
X:complement(30040439..30055210)
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AA seq
573 aa
AA seq
DB search
MRSWVLLLLLAALSAARLRLGSAEGDPLPLSLVDLVRNSPISSVDDLKLLLQQETNAIEE
EEDEHDILTNHTHGRYTRSLVDAQPAQQAACKVRTEVMEVTRSMLDRRNANFLLWPPCVE
VQRCSGCCNTRLLQCVPTVTSSRYLQVIKIQYINRKAHYDKAIISVEDHITCRCQPSSSS
PSSPSSSSSSSVPITHSSVQSNPNPPSPQQPPPSSHLPSLPRGVHPAPPKTHASKADLHR
HDDLKHNQQRYHPEEREPVARQWQQGSYTQLVHWTQPRVHQAPTHVQPGVHQPIVGVLGP
VSNWPSEARGEHSVMGGTQQVGHGSGYDGSREESGAHVANSGGEVNHPDHMQRQQQLLQH
QQRQQQYQYHHQPHYPQHYNHGGAEDQELRTQYRLNAPQSDSSSPPGSPTHPPKLEQNST
PPMTTYQKDSVTSQKITEVTNHRQTETETTSQKQGSEREESGSANSGDAARAELANQGKD
KDLKLTSGDGHLTEEEGRQKTLETVQRELDRETHLHPHHPQQRPKPTTFKTALSTVAPIS
PSARRAPFRPASTRRRRKHRKRISKAAIRAMIM
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcctgggtcctgctgctgctgctggctgcgctctcagcggcccgtctgcggtta
ggaagcgctgagggtgatcctctcccactgtcgctggtcgacctggtgagaaactctccc
atctcctctgtggacgacctgaagctgctgctgcagcaggaaaccaatgcaatagaagaa
gaggaggacgagcatgatattctcacaaaccacacccatggccggtacactagaagtctt
gtagatgcacagccggctcaacaggcagcgtgtaaagttcggacggaggtgatggaggtg
acgagatccatgctggaccgccgcaatgccaatttcttgttgtggccaccctgtgttgag
gtgcagcgatgttcgggctgctgcaacaccaggctgctacagtgtgtccccactgtcacc
tccagcagatatctgcaggtaataaagatccagtacataaacaggaaagcccactatgac
aaagccatcatctcagtggaagaccatatcacctgtaggtgccaaccgtcctcatcctcc
ccgtcttccccgtcctcctcttcctcctcgtctgttcccatcactcactcctccgtccaa
agcaaccccaacccaccttctccgcagcagcctcccccttcctcccaccttccctccctc
ccccggggcgtccaccccgctccaccaaagactcacgcttccaaggctgacctgcatcgc
cacgacgaccttaagcacaaccagcagcgctaccatcctgaggagcgtgagccggtggcg
aggcaatggcagcagggcagttacacccagctggtgcactggacgcagcccagagtgcac
caggcgcccacacatgtgcagccgggcgtgcaccagccgattgtcggggtgcttgggcca
gtcagcaactggccatctgaagcaaggggagagcatagtgtcatgggaggtacacagcag
gttgggcatgggagcggatatgacgggagcagggaagaaagcggtgcgcatgtagcaaac
agcggtggggaggtgaatcatccagatcacatgcagaggcagcaacagttgttacagcat
cagcaaagacagcagcaatatcagtatcatcatcagccgcattacccacaacattacaac
catggaggagcggaggaccaagagctgaggacacaatatcgactcaacgctccccagtca
gacagctcgtctccacctggcagcccaacccacccacccaaattagaacaaaactccacc
cctcccatgaccacctatcagaaagactcagtgaccagccaaaagattacagaggtcaca
aatcatagacagactgagactgaaacaaccagtcaaaaacaaggaagcgagagggaggaa
agtgggtcagccaatagtggggatgcagccagggcagagctggccaatcagggcaaggat
aaagacttaaaattgaccagtggggatggtcatttaacagaggaggagggcagacagaaa
actctggagacggtacagagggaactggatcgagagactcatcttcatccgcatcatcct
cagcaaagaccaaaacccaccacatttaaaacagccctctccactgtggctcccatctca
ccctcagctcgtcgggctccgttccgaccagcctcgacccgccgcaggaggaaacaccgc
aaacgcatcagcaaagcagccatcagagccatgatcatgtag
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