Larimichthys crocea (large yellow croaker): 104926536
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Entry
104926536 CDS
T04659
Name
(RefSeq) ATP-dependent RNA helicase DDX39A
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lco03041
]
104926536
Enzymes [BR:
lco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104926536
Spliceosome [BR:
lco03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
104926536
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
104926536
NCBI-ProteinID:
XP_019117214
UniProt:
A0A6G0JAV5
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Position
X:28237183..28242160
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AA seq
427 aa
AA seq
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MAETDVDNELLDYEEDEEPQGAPESGTPANKKEVKGSYVSIHSSGFRDFLLKPELLRAIV
DCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCH
TRELAFQISKEYERFSKYMPTVKVSVFFGGLAIKKDEEVLKKNCPHIVVGTPGRTLALIH
GKSLSLKNIKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQVMMFSATLSKEIRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYCKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVHRCV
ALSQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN
YDMPEDSDTYLHRVARAGRFGTKGLAVTFVSDETDAKTLNDVQDRFEVNVAELPDEIDIS
SYIEQSR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggctgagaccgacgttgacaatgaacttctggactatgaggaggacgaggagccccaa
ggagcccctgagagtgggaccccagcgaacaagaaggaggtgaaggggtcctacgtgtca
atccacagctccggcttcagagactttctcctcaaaccagagctgctccgcgccattgtt
gactgcggttttgagcatccctcagaagtacaacatgagtgtattccccaagctatcctg
ggcatggacatcctctgccaggccaagtctggtatgggaaagacagcagtgtttgttctg
gccactctccagcagattgaacctgtggatggtcaggtctctgttctcgtaatgtgccac
acacgagagttggctttccagatcagcaaagagtacgagcgcttctccaagtacatgccc
actgtcaaggtgtcggtattcttcggtggcctggccatcaaaaaggacgaggaagtcctg
aagaagaactgcccccacatcgttgtaggaactccaggacgtactctggccctcatccac
ggcaaatccctcagcttgaagaacattaaacactttgtgctcgacgaatgtgataagatg
ctggagcagctggatatgaggcgtgacgtccaggaaatcttcaggctgacaccacatgag
aagcaggttatgatgttcagtgccacgctaagcaaggagatccgccctgtctgcaggaag
ttcatgcaagatcccatggaggtgtttgtggacgacgagaccaagctgacactccatggc
ttgcagcagtattactgcaagttgaaggacagcgagaagaaccggaagctctttgacctg
ctcgacgtgctcgagttcaaccaggtggtgatctttgttaagtcagtgcatcgctgtgtg
gctctgtcccagctgctggtggagcagaatttccctgcgatcgccatccacaggggcatg
gcacaggaggagcggttatcccggtaccagcagtttaaagacttccagcggcggatcctg
gttgcaaccaacctgtttggccgaggcatggacatcgagcgagtcaacatcgtcttcaac
tatgacatgccagaggattctgatacataccttcacagagtggcccgtgctggcaggttt
gggaccaaaggcctggctgtcacctttgtgtcagacgagactgacgctaagaccctgaat
gatgtccaagaccgctttgaggtcaacgtagcagagctaccagacgagattgacatctcc
tcctacattgaacagtccagatga
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