Larimichthys crocea (large yellow croaker): 104926938
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Entry
104926938 CDS
T04659
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1D
KO
K04851
voltage-dependent calcium channel L type alpha-1D
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04010
MAPK signaling pathway
lco04020
Calcium signaling pathway
lco04218
Cellular senescence
lco04260
Cardiac muscle contraction
lco04261
Adrenergic signaling in cardiomyocytes
lco04270
Vascular smooth muscle contraction
lco04530
Tight junction
lco04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
104926938
04020 Calcium signaling pathway
104926938
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
104926938
09144 Cellular community - eukaryotes
04530 Tight junction
104926938
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
104926938
09153 Circulatory system
04260 Cardiac muscle contraction
104926938
04261 Adrenergic signaling in cardiomyocytes
104926938
04270 Vascular smooth muscle contraction
104926938
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lco04040
]
104926938
Ion channels [BR:
lco04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
104926938
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CAC1F_C
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
104926938
NCBI-ProteinID:
XP_027144236
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Position
XV:23156338..23197679
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AA seq
2051 aa
AA seq
DB search
MALFFAFCSLWLLSFLLCFHDISVTALFSLLPPPSRLFSVVLEMITKDADSGGQTGGKPG
GFDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVIIIYAIIGLEL
FIGKMHATCYVIKTGALVEEESTPCAVSGHGRQCLLNGTVCREGWQGPNNGITNFDNFLF
AMLTVFQCITMEGWTDVLYWMNDAMGFELPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKE
REKAKARGDFQKLREKQQLEEDLKGYLDWITQAEDIDPENEEEGDEEGKRNPSMPTSETE
SVNTENHNGVEDKSPCCGPLCQKITKSKCSRQWRRWNRFCRRKCRAAVKSVTFYWLVIIL
VFLNTLTIASEHYNQPDWLTEVQDVANKVLLAMFTLEMLVKMYSLGLQAYFVSLFNRFDC
FVVCGGIIETILVELAIMSPLGISVFRCVRLLRIFKVTRHWASLSNLVASLLNSMKSIAS
LLLLLFLFIIIFSLLGMQLFGGKFNFDETVTKRSTFDNFPQALLTVFQILTGEDWNTVMY
DGIMAYGGPASSGMVVCIYFIILFICGNYILLNVFLAIAVDNLADAESLNTAQKEEEEAK
KRKNSAKDISIDKKKVEIMESKDGETKVPAEGLLEEDKESYPAINPQDDDDNNDDLPEVP
SGPRPLRMSELTIKEKTPPIPAGSAFFIFSSTNPFRVFCHKLINHQIFTNLILVFIMLSS
VSLAAEDPIRNFSARNIILGYFDYAFTAIFTVEILLKILGYADYVFTSMFTFEILIKMTA
FGAFLHKGAFCRNYFNLLDLLVVGVSLVSFGIQSSAISVVKILRVLRVLRPLRAINRAKG
LKHVVQCVFVAIRTIGNIMIVTTLLQFMFACIGVQLFKGKFYRCTDDAKSSPEECKGTYI
LYNNGDAALPMVKERIWYNSDFNFDNVLMAMMALFTVSTFEGWPTLLYKAIDSNKENMGP
IYNYRIEISIFFIIYIIIIAFFMMNIFVGFVIVTFQEQGEKEYKNCELDKNQRQCVEYAL
KARPLRRYIPKNPYQYKFWYVVNSTGFEYVMFVLIILNTLCLAIQHHGQSHLFNYAMDIL
NMVFTGVFTVEMILKLIAFKPRGYVGDAWNVFDALVVIGSVVDIILSQNYFADAWNTFDA
LIVVGSVVDIAITEINSAAIPVVKVIVEPGNTEDSARISITFFRLFRVMRLVKLLSRGEG
IRTLLWTFIKSFQALPYVALLIAMLFFIYAVIGMQVFGKIAMVDGTQINRNNNFQTFPQA
VLMLFRCATGEAWQEIMLACLPGKLCDSESDYNPGEERTCGSGFAIIYFISFYMLCAFLI
INLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWSEYDPEAKGRIKHLDVVTLLRRIQPP
LGFGKLCPHRVACKRLVAMNMPLNSDGTVMFNATLFALVRTALKIKTDGNLEQANEELRA
VIKKIWKRTSMKLLDQVVPPAGDDEVTVGKFYATFLIQDYFRKFKRRKEQGLVGRRSWER
LNTTMALQAGLRTLHDIGPEIRRAISCDLQQEGLVDPNGEEEEEIYRRNGGLFGNHVNHV
NTDQQGYYHPTTVTQRPLQILPSSCSASIEPTQTGRRASDDDREGETEMNSSPIQYNHHY
HTHHPYNYSHCIPTCHHSPIPSNANLNNANVPSHLSMTNGRQQKCLSRDRPSSTKNGSSV
STYRKGVHDKLWKSHSTRTRYYEAYIRSESGGGFYPTICREEPGGRDSDDERGSGEYYSG
EEFHEDDIMLTRDRLSNNSQHDAEGEFDLEVSRGHHQPDGYYDDDQQPIYQDGRRSPRRW
FLPSPQASHRPTFSFECLRRRSSQDEPPHSPSCTALPLHLVQQQVMAVAGLDASRIHHLS
PARSLHSWATPPASPSSRDCSPCYTPLIQVDWRSSGSVGSIPAAMKRSSWYTDSQDGPSS
RSQSPSRLQLPAESCSHFLQKRGSANSLVEAVLISEGLGKYARDPKFVSATKHEIADACE
MTIDEMDSAASNLLNGSMDHGNTGATENVSSEPHAPHLKERSIRDYSDEEPYVAVKCEED
LTDEMICITSL
NT seq
6156 nt
NT seq
+upstream
nt +downstream
nt
atggctttgttctttgctttctgttcgctttggcttttatcttttttgctctgttttcat
gacatctctgtcactgctctcttctccctccttcctcctccctccaggttgttcagtgtg
gttctggagatgataaccaaagatgctgactctggtggccagactggaggcaaacctggg
gggtttgatgtcaaggccctccgagcctttcgcgtactacgaccccttcgccttgtctct
ggagtccccagtttacaggtggttttaaactccattattaaagccatggttcccttgctt
cacatcgctctgctggtcctcttcgtcattatcatctatgccatcatcggcctggagctc
tttattggaaaaatgcatgccacatgctacgtgattaaaacaggtgcccttgtggaagaa
gagtccacgccgtgtgcggtatcagggcatggccgtcaatgcctgctcaatggcacagtt
tgcagagagggctggcaaggccccaacaatggcatcaccaacttcgacaactttttgttt
gccatgctcactgtgttccagtgtatcaccatggagggctggactgatgtcctgtactgg
atgaatgatgcaatgggctttgagctgccgtgggtctactttgtcagtctggtcatcttt
ggatctttctttgttctcaacttggttttgggtgtgttgagtggagagttttccaaagag
cgagagaaggccaaggctcggggagatttccagaagctacgtgaaaagcagcaattagaa
gaagatctgaagggttacctggactggatcacccaggccgaggacattgaccctgagaac
gaggaagagggagacgaggagggaaagcgtaacccaagcatgcccacgagtgagacagag
tcagtgaacacagagaatcacaatggagtggaggacaaatcaccctgctgtggaccgctg
tgtcaaaaaattactaagtcaaagtgcagtcgtcagtggcgacggtggaaccgtttctgc
cgccggaagtgtcgtgcagctgtgaaatctgtaacattttattggctggtcatcatcttg
gtgttccttaacactctcaccattgcctctgagcactacaaccagcctgactggctaact
gaagtacaagatgtagccaataaagttctgctggcaatgttcaccttggagatgctagtg
aagatgtacagtttggggctgcaggcttactttgtgtccctgtttaaccgctttgactgt
ttcgtggtgtgtggaggcatcatagagacaatcctggtggagctggccatcatgtctcca
ctgggtatctctgttttccgttgtgtacgactccttaggatcttcaaggtcacacgtcat
tgggcatctcttagtaacctggtggcctctctgctcaactccatgaagtccatcgcctcc
ctgttgctgctgctcttcctcttcatcattatcttctccctgcttggcatgcagcttttt
gggggcaaattcaactttgatgagactgtgacaaaaaggagcacatttgataacttcccc
caggccttgctcactgtgttccagatcttgactggagaagactggaatacggtgatgtat
gatggcattatggcgtacggtggtccggcctcctctggaatggtggtgtgcatttacttc
atcattctcttcatctgtggaaactacatcctactcaacgtcttcttggccattgccgta
gacaacctggcagacgccgagagcctgaacacagcacagaaggaggaagaagaggccaaa
aagaggaagaatagtgccaaggatataagcatagataagaaaaaagttgaaattatggaa
agcaaggatggagagaccaaggtgccagcagagggcttgctggaggaagacaaagagtcg
tatcctgccatcaaccctcaagatgatgatgacaataatgacgacctcccagaagtcccc
tctgggccccgccctctgaggatgtctgaactcaccatcaaagagaaaactccacccatc
cccgcaggcagcgctttcttcatcttcagcagcaccaacccgtttcgtgtattctgccac
aagctgatcaaccatcagatctttaccaacctcatcctggtcttcatcatgctcagctcc
gtctctcttgctgctgaggaccctatacgcaatttttctgcccgcaatatcatacttggt
tattttgactatgctttcaccgcaatctttactgttgagatcctgttgaagatcctaggc
tatgcagactatgtcttcactagtatgtttacatttgagatccttattaagatgacagcg
tttggagcgttccttcataaaggagcattctgtagaaactacttcaaccttttagacctg
ctggtcgttggtgtgtctctggtctcgtttggcatccagtcttctgctatctctgtggtg
aagattctccgagttttgagagtcctccgtccgctcagagccatcaacagagccaaagga
ctaaagcacgtggtccagtgtgtgtttgtggccatcaggactatcggcaacatcatgatc
gtcaccactctgctacaattcatgtttgcttgtattggagtgcagctcttcaagggaaaa
ttttatcgctgcactgatgacgctaagtccagtccagaggagtgcaaaggtacctacatt
ctctacaacaatggggatgcagcgcttcccatggtgaaggagaggatctggtacaacagt
gacttcaactttgacaacgtgctcatggccatgatggctctttttaccgtctccaccttt
gaaggatggcctacgctactttacaaggccattgactcaaacaaagagaacatgggtccc
atctacaactaccgcattgagatctccatcttcttcatcatctacatcattataatcgcc
ttcttcatgatgaacatctttgtcggttttgttatcgtcacctttcaggagcagggagag
aaggagtacaagaactgtgagctggacaagaaccagcgtcagtgtgtggaatatgctctt
aaagctcgtccactgaggcgatacatccccaaaaacccctaccagtacaagttctggtat
gtggtcaattctactggctttgagtacgtcatgtttgtcctaatcatcctcaacaccctg
tgtctggccattcagcaccatggtcagtctcatctgtttaattatgccatggacattctc
aacatggtcttcactggggttttcactgtggagatgatcctcaaactcatcgccttcaaa
cccagaggctatgtcggggacgcctggaatgtcttcgatgccctggtggtgattggcagt
gtagtcgacatcatactcagccagaactattttgctgatgcatggaacacgtttgatgcc
ttaattgttgtgggtagcgtggttgacattgccatcactgaaatcaattcggcagccatt
cctgtcgtcaaggtgatagtggagccagggaacacggaggacagtgctcgcatctcaatc
acattcttccgcctgttcagagtgatgcgattggtcaaactgctgagcaggggggagggc
atcaggactctgctgtggaccttcatcaagtccttccaggctcttccctatgttgcactc
ctgatagccatgctattcttcatctatgctgtaattggaatgcaggtgtttggaaaaata
gccatggtggatggaacccaaattaaccgcaacaacaactttcaaacctttcctcaagcc
gtcctaatgcttttcaggtgtgccacaggtgaggcctggcaggagatcatgctggcctgt
cttccagggaaactgtgtgattcagagtcggattacaaccccggagaggagagaacctgt
ggcagcggctttgctattatctacttcatcagcttctatatgctctgtgctttcctgatc
atcaacctatttgtagctgtcatcatggataactttgactatctcacccgtgattggtcc
attcttgggcctcatcacctggatgagtttaaaaggatctggtccgaatacgaccctgaa
gccaagggcaggataaaacaccttgatgtggtgactctgctgaggaggatccagcctcca
cttggttttggcaagctctgccctcacagggtggcctgtaagcgtctggtggcaatgaac
atgcccctgaacagtgacgggactgtcatgtttaatgccaccttgtttgctttggtccgc
actgctctcaagattaagactgatggtaacctggagcaagccaacgaagagcttcgagct
gtgatcaagaagatctggaagaggaccagtatgaaactgctggaccaagtggttccccct
gcgggcgatgacgaggtaacagtggggaagttctatgccaccttcctgatacaggactac
ttcaggaagttcaagaggcgcaaagagcaaggtcttgtggggaggcgctcatgggagaga
ctaaacactacaatggctctacaggccggtctgcgcacgctgcatgacattggaccagag
atccgtcgagccatatcatgtgacctgcaacaggaggggctagtagacccaaatggagag
gaagaagaggaaatctacaggcgcaatggtggcctttttggaaaccatgtcaaccatgtc
aacacagatcaacaaggatactaccatccgactactgtcacccaacggccactacagatc
ctgccctcatcctgcagtgcctcaattgaacccacccaaacaggcaggagagccagcgac
gatgacagagaaggagagacagagatgaactcttcacccatccagtataatcatcattat
cacactcatcatccgtataattattctcactgtattcccacttgccatcattcgccaata
ccctccaatgccaacctcaacaatgccaacgtgccctcacatctctccatgaccaatggg
aggcagcagaagtgtttaagtcgagaccgtccatcttccaccaaaaatggatcatcagtg
tccacatacagaaaaggagtacacgacaagctctggaagtcacactccacaaggacacgc
tactatgaggcctacattaggtcagaaagcggcggtggattctatcccaccatttgcaga
gaggagccaggtggcagggacagcgatgacgagcgaggctcaggagagtactacagcggg
gaggaatttcatgaagatgatatcatgctcacaagagacaggttgtccaacaacagccag
catgatgcagaaggagagtttgatctcgaggtttccaggggccaccaccagcctgatggt
tactatgacgatgaccaacagccgatctaccaagatggcaggcggtcgccaaggagatgg
tttttaccctcacctcaagcctcccacagaccaacattcagttttgagtgtcttcgcaga
agaagtagtcaggatgagcctcctcactctccatcctgcacagctcttccactacaccta
gtgcagcaacaggtaatggcggtggcaggtctcgatgccagcagaattcaccacctatct
cctgcacggtcacttcattcctgggccacacctcctgcctcacccagcagtcgtgactgc
tcaccatgctatacaccactcatacaggtggactggcgcagttccggcagtgtcggcagc
atccctgcagcaatgaagaggagctcgtggtataccgacagccaggacggtccttccagc
cgcagccaatctccgtcacgtctgcagttacctgcagagagctgctcacactttctgcag
aagagaggaagcgccaacagtttagtggaggctgtgttgatctctgaaggtctcgggaaa
tacgccagggaccccaagtttgtgtcagcgaccaaacacgaaatcgcagatgcctgtgag
atgaccatcgatgagatggacagcgccgccagtaacctcctgaatggcagtatggatcac
ggtaacacaggggcaacggagaacgtcagctcggaaccacatgccccgcatcttaaagaa
cgcagtatacgtgactacagcgatgaggagccatacgtggctgtgaaatgcgaggaggac
ctaacagacgagatgatatgcatcacgtcgctatag
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