Larimichthys crocea (large yellow croaker): 104927056
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Entry
104927056 CDS
T04659
Name
(RefSeq) platelet-derived growth factor receptor beta
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04010
MAPK signaling pathway
lco04020
Calcium signaling pathway
lco04510
Focal adhesion
lco04540
Gap junction
lco04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
104927056
04020 Calcium signaling pathway
104927056
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104927056
04540 Gap junction
104927056
09142 Cell motility
04810 Regulation of actin cytoskeleton
104927056
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lco01001
]
104927056
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
lco04090
]
104927056
Enzymes [BR:
lco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
104927056
Protein kinases [BR:
lco01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
104927056
CD molecules [BR:
lco04090
]
Proteins
104927056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
Ig_2
ig
V-set
C2-set_2
Adeno_E3_CR1
VEGFR-1-like_Ig-like
RIFIN
Haspin_kinase
Adeno_E3_CR2
Motif
Other DBs
NCBI-GeneID:
104927056
NCBI-ProteinID:
XP_019109315
LinkDB
All DBs
Position
I:35962603..35989823
Genome browser
AA seq
1099 aa
AA seq
DB search
MRRLHLTVTVTALLYFCTELCCLKITPDDKELVLAKGSSLSLTCSGSEGAKWEFKRDDVP
YFQVESVQNGAESYQVAHSSSTDTVLTLLNVSWKHTGVYQCFDELTEEIKEVAVFVPDPN
VWFIERSHGMVTKTSEETTIPCVVTNPNINVTLYERDTDLPIRGLYVPSEGYKAPLEDRT
YVCRGELNGEVKESQAFYVFSIVVPEAIDAYINASKTVLKQGEPLTVNCTVHGVELVFFS
WDLPNAAADVSPLTDVLSAMNMRSCLIFPSATVAHSGKYICHVLESVQDQTASASVNITV
LERGFVDVKPAQKQNISAKLQENVELRMEIEAYPPPRVYWSKDGATVKGDKIITTRQEHE
IKYVSILTLVRVRTEQKGLYTVHVTNGDDTKEVTFDLEVRVPSQIKDLTDHHLPGKRHLV
TCVAEGVPTPTIQWYSCDSMLKCNNQTAMWQSLIPEPEVLSIKTNVSFSETRKTSQVRSQ
VTFHKPQQVTVRCETSNQAGLIDRRDVKLVSSTLFSQVAVLAAVLALVAIIIMSIIILIA
VWRKKPRYEIRWKVIESVSQDGHEYIYVDPIHLPYDLAWEMPRDNLVLGRTLGSGAFGRV
VEATAYGLTHSQSSTKVAVKMLKSTARRSETQALMSELKIMSHLGPHLNIVNLLGACTKH
GPLYLVTEYCRYGDLVDYLHRNKHSLLQYYAEKNQDDGCLISGGSTPLSQRKGYVSFGSE
SDGGYMDMSKDEPSIYVPMQEQMDSIKYADIQPSPYESPYQQDIYQEQGGGRLDLVIGDS
PILTYDDLLGFSYQVAKGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMHDS
NYISKGSTFLPLKWMAPESIFHNLYTTLSDVWSYGILLWEIFTLGGTPYPDLPMNELFYS
ALKRGYRMAKPTHASDEVYEIMKKCWDEKFEKRPEFSFLVHSVGNMLADSYKKRYNQVND
NFLKSDHPAVARTKPRLSSPFPIANPAFGSPSSGTLSFPQDPYNQSPNPGEFRQEADAQE
VIPSYNEYIIPIPDPKPEEVFTDVPSERPASSLALEEETDSMSQDTADTLPEEDRLEETS
ERDALLGSSGTPEVEDSFL
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atgaggaggctccatctgacagtcacagtcacagccctcctgtatttctgcaccgagttg
tgctgtctgaagatcacacctgatgacaaagagctcgtcctggccaagggctcttctctc
agcctcacctgctccggctcagagggcgcaaaatgggagttcaagagagacgatgtgccg
tacttccaagtggaatcagttcaaaacggtgctgaaagctaccaagtcgcccacagcagc
agcacagacactgttttgaccttgttgaacgtgagctggaagcatacgggggtgtaccaa
tgctttgatgaactcactgaagaaattaaggaggtggctgtttttgtcccagaccccaat
gtgtggttcatagagaggtcccatggcatggtaacaaagaccagtgaggagaccaccatc
ccctgtgtggtgaccaatcccaacatcaatgtcaccctgtatgagagggatactgatttg
cccatcagggggctttatgttcctagtgagggttacaaggcacccctggaggacaggacc
tacgtgtgtcgcggagagctgaacggcgaggtgaaagagtcccaggccttctacgtcttc
agtattgtcgtcccagaggccatcgacgcctacatcaatgcgtcaaagaccgtcctgaag
cagggtgaaccgctgacagtaaactgcacagtgcacggagtggaactagtgtttttttcc
tgggatctccccaatgcagcggcggatgtcagtccgctgacggatgtcctgtctgccatg
aacatgcgatcctgtctgatcttccccagtgccacggtggcccacagtggaaaatacatc
tgccatgtcctagagagtgtccaagaccagactgcgtctgccagtgtcaacatcactgtg
ctcgagcgtggctttgtggatgtgaaacctgcacagaaacaaaacatttcagccaagctg
caagaaaatgtggagctgagaatggagattgaagcctaccctccccctcgggtgtactgg
agcaaagatggcgccaccgtaaagggagacaaaatcatcacaaccagacaagagcatgag
atcaagtatgtctctattctcaccttggtgagggtgaggacggagcagaagggcctctac
accgttcatgtcacaaatggagacgacacaaaggaagtgacctttgacctggaggtccga
gttccctctcagattaaagacctgacagaccaccacctcccggggaagagacacttggtg
acctgcgtggctgagggggtcccaacaccgaccatacagtggtacagctgtgacagcatg
ctcaagtgcaacaaccagacagcgatgtggcagtctctgataccagagccagaggtgctg
agcatcaaaactaatgtgagcttcagtgagactcgaaaaaccagccaggtacggagccag
gtgaccttccacaagccccagcaggtcacagttcgctgtgagacaagcaaccaagcagga
ctcatcgacaggagagacgtcaaactggtgtccagcactctgttctcccaggtggcagta
ttggctgctgttctggccttagttgccatcatcattatgtccatcataatcctcattgct
gtatggaggaagaaacctcgttatgagatcagatggaaggtgatagagtctgtgagccag
gacggccatgaatacatctatgtcgaccccatccacctgccctatgacctggcctgggag
atgccacgagacaacctggtgctgggtcgcactcttggatcaggagcctttggcagggtg
gtcgaggcaactgcgtacggtctcactcattcccagtctagcacaaaagtggccgtgaaa
atgttgaaatccacagccaggaggagtgagactcaggctctgatgtcagagttgaagatc
atgagtcacctgggtcctcacctcaacatcgtcaacttgcttggagcttgcaccaaacat
ggccctctatacctggtgactgagtactgtcgctatggcgacctggtggactacctgcac
aggaacaagcacagcctcctgcagtactacgctgagaagaaccaagacgacggctgcctc
atctctggaggaagcactccgctcagccagaggaaaggctacgtgtcttttggaagtgag
agtgacggaggatacatggacatgagtaaagatgagccgtcgatctacgtgcccatgcag
gagcagatggacagcatcaagtacgcagacatccagccctctccgtacgaatctccctac
cagcaggacatctatcaggaacaaggtggaggcagattggacctggtcatcggtgactct
cctattcttacctatgacgatcttttgggcttcagctaccaagtggcgaagggaatggag
ttccttgcctccaagaattgtgtccatcgtgacctcgctgccagaaatgtgttgatctgt
gagggtaaactggtgaagatctgtgactttggcttggccagagacatcatgcatgactcc
aactacatctccaaaggcagcactttcctgcccttgaagtggatggcaccagaaagcatt
ttccataatttgtacaccaccctgagcgatgtgtggtcatacggcattcttctttgggag
attttcacactgggaggaaccccctatcctgatttgcctatgaatgagttgttctacagc
gctttgaagagaggctaccgaatggccaaacccacccacgcctctgatgaagtttatgag
atcatgaagaagtgctgggacgagaagtttgagaaaaggcctgagttctcctttctggtc
cacagtgttggaaatatgttggcagacagctataaaaagagatacaaccaagtcaatgac
aacttcctgaagagtgaccacccagcagtcgcccgcaccaaaccccgtctttcctcgccc
tttccaatcgccaacccagcattcggctccccatcttctggcaccctctccttcccccag
gacccctacaaccagagcccaaaccctggagaattcagacaagaggcagatgcacaggaa
gtcataccttcatacaacgaatacatcattcccatcccagaccccaagccggaggaggtt
ttcactgacgtgccatcagaacgccctgcaagctctctggctcttgaagaggagaccgac
tccatgtcgcaggacacggctgacactcttccagaggaggacaggctggaggagaccagt
gagagagacgctctgctgggctcttcggggacgcccgaggtagaagacagcttcctgtag
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