Larimichthys crocea (large yellow croaker): 104927538
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Entry
104927538 CDS
T04659
Name
(RefSeq) ephrin-A1 isoform X1
KO
K05462
ephrin-A
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
104927538
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
lco04052
]
104927538
00536 Glycosaminoglycan binding proteins [BR:
lco00536
]
104927538
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lco00537
]
104927538
Cytokines and neuropeptides [BR:
lco04052
]
Cytokines
Growth factors (RTK binding)
104927538
Glycosaminoglycan binding proteins [BR:
lco00536
]
Heparan sulfate / Heparin
Axon guidance molecules
104927538
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lco00537
]
Others
104927538
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ephrin
Motif
Other DBs
NCBI-GeneID:
104927538
NCBI-ProteinID:
XP_010739938
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All DBs
Position
XIII:complement(41870125..41884005)
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AA seq
224 aa
AA seq
DB search
MDLVWIVGLVVSVCSWFASAERHSVYWNSTNPKFLWDDYAVEVKLNDYLDIVCPHYPQGE
VPLLDAERYVLYMVEREDYESCKPQSYDQMRWECGHPFAPHAPEKFSEKFQRFTPFTLGK
EFRQGESYYYISKPLHHHGKECLRLRVDVVAADGSQEARVAKGGTGGAGVGAEGGVHNPS
NRLPAADDPVVILPDIQRVTGKSSTVAATAFTLLVPFSLLLLLH
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atggatttggtttggattgtgggcttggttgtgagcgtctgctcctggtttgcttcagcg
gagcgacacagcgtctactggaacagcacgaacccaaagtttctgtgggacgactatgcc
gtggaggtgaagctcaacgactacctggacatcgtatgcccccattatcctcagggtgag
gtgccgttgctggatgctgagagatacgtgctctacatggtggaacgcgaggactacgaa
tcctgcaagccccagtcgtacgatcagatgcgctgggagtgtggccacccgttcgctcct
cacgcccccgaaaagttctctgaaaagttccagcgttttactccatttactctgggaaag
gagttccgccaaggagaaagctactattatatctccaaacctttgcaccaccatggaaag
gagtgcctcaggctcagggtggacgtcgtagctgctgatggctctcaagaggccagagtc
gctaaaggaggcacaggtggggctggagttggagctgagggtggggttcataacccatcc
aacagactgcctgcagcagatgacccagtggtaatcctgccagacatccagagggtcaca
gggaagagctctacagtggcagctacagccttcacattgctagtcccattttcattactg
ctattgttgcactga
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