Larimichthys crocea (large yellow croaker): 104929586
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Entry
104929586 CDS
T04659
Name
(RefSeq) PHD finger protein 1 isoform X1
KO
K11467
PHD finger protein 1
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
104929586
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lco03000
]
104929586
03036 Chromosome and associated proteins [BR:
lco03036
]
104929586
Transcription factors [BR:
lco03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
104929586
Chromosome and associated proteins [BR:
lco03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
104929586
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_2
PHD
Mtf2_C
PHD_ash2p_like
PHD_2
Chromo
ASH2L-like_WH
DUF4537
Zip
Motif
Other DBs
NCBI-GeneID:
104929586
NCBI-ProteinID:
XP_027142981
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All DBs
Position
XIII:complement(33833290..33850687)
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AA seq
563 aa
AA seq
DB search
MGGVSEGDDVLARWSDGLLYLGNVKRVDGVKQCCLVRFEDNSEFWVLRKDIHSFAAGVEE
VCCICDAPPLKEPLINCLKCRHGYHPECHTPTIEPEADSDSWICRQCVFAVATKRGGALK
RGRFARLMQFMKLRLTYQLSSLDWDPQHLTNQQQCYCYCAGPGEWNLKMLQCGSCGQWFH
EACTQCLTKPLLYGDRFYQFQCSVCTKGPETIQRLPMTWVDLAHLVLYHLSLCCKRKYFD
FDHEILSFTNENWESLLLGALSDTPRQDRCHNLLNALNSNKDRFVSGKEIKKKKCLFGLQ
VRAPPPLTSDSSPLITDPPINITHRRRSDPLSLPCQRRVGGAESRKSKRRIMETQACPPP
VAANPIELLPCCHGYMGGASLYNSRKSDEDLSLSSPPKRMYALYHATYNGNTSLSRSLHH
YNSMEDTCRLPPPCFPYPLNSNGSHHHHHLHHNHQHNYQHNHQHQPGPKQLEPVILRDLP
PYQTGMGGAGGGGGNGGGGGGGGGSDGGGEGGGGGGGGMGVGGGDGTVSRSWGGGEAVRI
LARRVTPDGKVQYLVEWENVSLY
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggggggagtaagtgaaggagatgatgtgttggctcgatggagtgatggactactgtac
ctcggcaatgtgaaaagagtagatggagtcaagcagtgttgtctggtgagatttgaggac
aactccgagttctgggtgctgagaaaggacatccactcgttcgctgctggagtggaagaa
gtttgctgtatttgtgacgctccacctcttaaagaacccctcataaattgtcttaaatgt
cgccacggttatcatccagagtgccacacgccaaccatcgaaccggaagctgacagcgat
tcgtggatatgtcggcaatgtgtctttgccgtcgcgaccaagagaggtggggcgctcaaa
cggggacgtttcgcccggctcatgcagtttatgaaactccggctcacctaccagctgtcg
tctttagactgggacccgcagcatttgaccaatcagcaacagtgttactgctactgtgcc
ggacctggagagtggaacctgaagatgctgcagtgtggaagctgtggtcagtggttccac
gaggcctgcacgcagtgtctaaccaagccattactgtatggagacaggttttatcagttc
cagtgctcagtttgtacaaagggaccagagaccatccaaagactacccatgacctgggtg
gatttggctcatttagtgctctaccatctctcgctgtgctgcaagaggaaatactttgat
tttgaccatgaaatcctgtccttcaccaatgagaattgggagtcgttgctcctaggcgcg
ctctctgacacgccaaggcaagaccgctgtcacaatctcctcaacgctctgaactccaac
aaggacaggtttgtctctgggaaggagatcaagaagaagaagtgtctttttgggcttcag
gtccgagccccgccaccgctgacgtccgactcgtcgcccctcatcaccgacccacctatc
aacatcacgcaccggagaaggtcagacccattgtcactaccctgccagaggagagttggt
ggggcagagtcacgtaaatcaaagcgtcgcatcatggagacacaggcctgtccacctcca
gttgctgccaaccccattgagctactgccatgttgccatggctacatgggaggggccagc
ctttacaactccaggaagtctgacgaggacctcagtttgagctctcctcccaagcggatg
tacgccctgtaccacgccacgtacaacggaaatacttcactctccaggagtctccatcac
tacaacagcatggaggacacctgcagattacctccaccctgcttcccataccccctcaac
tccaatggcagccatcaccaccaccatctccaccacaaccaccaacacaactaccaacac
aaccatcaacaccagccaggaccgaagcagctggagcccgtcatcctacgtgatctgccg
ccttaccagaccggaatgggcggagcaggtggaggaggaggcaacggagggggaggagga
ggaggcggtggcagtgatggtggtggtgaaggaggaggaggaggaggaggcgggatggga
gtcggagggggggacgggacagtgtccaggagctggggaggaggggaggcggtgaggatc
ttggcgagacgcgtcacgccagacgggaaggtgcagtatctggtggagtgggagaacgtg
agtttgtactga
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