Larimichthys crocea (large yellow croaker): 104929906
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Entry
104929906 CDS
T04659
Symbol
slc6a11
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 3
KO
K05044
solute carrier family 6 (neurotransmitter transporter, GABA) member 11
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
104929906 (slc6a11)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lco02000
]
104929906 (slc6a11)
Transporters [BR:
lco02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
104929906 (slc6a11)
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GFIT
Motif
Pfam:
SNF
DUF4131
Motif
Other DBs
NCBI-GeneID:
104929906
NCBI-ProteinID:
XP_010742848
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Position
VI:complement(13758047..13782626)
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AA seq
611 aa
AA seq
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MTAEKSGPVINGKPEDGRDPEGSSSSLDNREYNERGHWNNKIEFVLSVAGEIIGLGNVWR
FPYLCYKNGGGAFFVPYVIFFVCCGIPVFFLETALGQFTSEGGITCWRKVCPLFEGIGYA
TQVIEAHLNVYYVVILAWAIFYLFNCFTTELPWAGCGHYWNTENCVDYTGENATNITNPN
ATSPVIEFWERRVLKISDGIEHMGGMRWELAMCLALAWFICYFCIWKGPKSTGKVVYVTA
TFPYVMLLVLLIRGVTLPGAYDGIKFYLYPDISRLSDPQVWVDAGTQIFFSYAICLGCLT
ALGSYNSYNNNCYRDCIMLCCLNSGTSFVAGFAIFSVLGFMAYEQNVPIEAVAESGPGLA
FIAYPKAVTMMPLSPLWACLFFMMLIFLGLDSQFVCVESLVTAVVDMYPETFRRGYRREL
LILGMSVVSFFIGLIMCTEGGMYVFQLFDSYAASGMCLLFVAIFESICIGWVYGSDRFYL
NIEDMIGYKPVFFIKWCWMILTPGICAAIFLFFLIKYKPLKYNNVYTYPDWGYGIGWFMA
MSSMVCIPLGIIWMIWKTPGTFSERIKKLTTPSKDLKMRGKLAALSPYAANDAKLKVDGK
ISTISEKETHF
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgacagctgagaagagcgggcccgttataaacggtaaaccagaggatggcagagatccg
gaagggtccagctccagcctagacaacagagagtacaacgaaaggggccattggaacaac
aagattgagtttgtcctgtctgtggctggagagatcatcggactgggcaacgtctggagg
tttccgtacctctgctacaaaaatggaggaggtgcgttcttcgtcccgtatgtcatcttc
ttcgtgtgctgcggtatccccgtgtttttcttggagactgccctgggtcagttcaccagt
gagggaggcatcacctgctggaggaaagtctgcccactgtttgagggtatcggctatgca
acgcaggtgattgaagctcatctaaatgtgtactatgtagtgatccttgcctgggccatc
ttctacctcttcaactgcttcaccactgagttgccgtgggctggctgtgggcactactgg
aatacagagaactgtgttgactacactggagaaaatgccaccaacattacaaaccccaac
gcaacttctccggtgattgagttttgggaacgcagagtgctgaagatatcagatggtatt
gagcacatggggggaatgcgctgggagctcgccatgtgtctggctctggcctggttcatc
tgctacttctgcatctggaagggacccaaatcaactggcaaggttgtgtatgtgactgct
acatttccttacgtgatgttgttggtcctgctgatcagaggagtgacgctgccaggagca
tacgacggcatcaagttctacctctacccggatatttcacgtctctctgaccctcaggta
tgggtggacgcaggaacccaaatcttcttctcttatgccatctgcttgggttgtctcact
gccctgggaagttacaattcctacaacaataactgctacagggactgcatcatgctgtgt
tgtctgaacagtggcaccagctttgtagcaggttttgctatcttctctgtgctgggcttc
atggcctacgaacaaaatgttcccatcgaggctgtggcagaatctggtcctggtcttgca
ttcattgcataccccaaggctgttactatgatgcctctatcgcctctttgggcctgtctg
ttcttcatgatgctcatcttcctcggtctggacagtcagtttgtgtgtgtggagagttta
gtgacagccgtggtggacatgtacccagagaccttcaggagaggctaccgcagagagctg
ctgattctgggcatgtctgttgtctccttcttcataggactcatcatgtgtacagagggg
gggatgtacgtcttccagctgtttgactcatacgctgccagcgggatgtgtttgctgttt
gtggccatatttgagtccatatgtatcggctgggtgtacggtagtgacagattctactta
aatatcgaggatatgattggctacaaacctgtcttcttcatcaagtggtgctggatgatc
ttgaccccgggaatctgtgctgcaattttccttttcttcctgattaaatacaaaccgctg
aagtacaacaacgtttacacctaccctgattggggttatggtattggctggttcatggcc
atgtcctcgatggtctgcatccctctggggataatctggatgatctggaagactcctggc
accttttctgagagaataaagaagctgacgactcccagcaaggacctgaaaatgcgaggg
aaactcgccgccctcagtccttacgctgccaatgatgcaaaacttaaggttgacgggaaa
atatccaccatctcagaaaaggagacacatttctaa
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