KEGG   Larimichthys crocea (large yellow croaker): 104930177
Entry
104930177         CDS       T04659                                 
Symbol
aptx
Name
(RefSeq) aprataxin isoform X1
  KO
K10863  aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
Organism
lco  Larimichthys crocea (large yellow croaker)
Pathway
lco03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:lco00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    104930177 (aptx)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lco03400]
    104930177 (aptx)
Enzymes [BR:lco01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase
     104930177 (aptx)
    3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase
     104930177 (aptx)
    3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase
     104930177 (aptx)
DNA repair and recombination proteins [BR:lco03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     104930177 (aptx)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     104930177 (aptx)
SSDB
Motif
Pfam: DcpS_C FHA_2 zf-C2HE HIT FHA zf-C2H2_6 zf-C2H2_7th_ZNF462
Other DBs
NCBI-GeneID: 104930177
NCBI-ProteinID: XP_010743199
LinkDB
Position
X:complement(2669769..2672775)
AA seq 370 aa
MPLCWLISEEGNHKPIRLPHLQAVILGRGPETTIKDKKCSRQQVQLKAECNKGYVKVKQL
GLNPTSVDSVVVGKDNEVKMKPGQRLHIVNQLYQYTVQFKEDPTGDQGGTKRPRESSSGD
RKGHKEAQSVKAVKETEKESVSASKGEATKNSVRGEWLRMCMCLPCCFYNVHVSVVIFSK
KHVTLNLLQEGFGHWSQGLKGSMQDPKMQVYKDDKVVVIKDKYPKARYHWLVLPWQSISS
LKALREEHCKLMKHMQRVGEQMVQQCPDASRLRFRMGYHAIPSLSHLHLHVISQDFDSPC
LKNKKHWNSFTTDYLMDSHDVIQMLETDGKVTVKEGTSELLKLPLRCHVCHSEIPTIPAL
KEHLKSHFPR
NT seq 1113 nt   +upstreamnt  +downstreamnt
atgccgctgtgctggctcatcagcgaggagggcaatcataaacccatcagactgcctcac
ctgcaggctgttatcctgggtcgaggtccagaaacgaccattaaagacaagaaatgctca
agacagcaagttcagctgaaagcggaatgcaacaaaggttatgtcaaagttaaacagctg
ggtttgaaccccacctccgtagactccgtggtggtgggaaaggacaatgaggtcaaaatg
aagcccggacagcggcttcatattgttaaccagctctaccagtacactgtacagttcaag
gaggatcccaccggggaccaagggggcaccaaaagaccacgagagtcgtcttcaggtgac
agaaagggccacaaagaggctcagagtgtgaaagcagtcaaagagacagaaaaggagtca
gtgtcagccagcaaaggagaagccacaaaaaacagtgtaagaggagaatggttgcggatg
tgcatgtgtttaccatgttgtttttataatgtccatgtgagtgtcgtaatattttccaaa
aaacatgttactttaaatttgttgcaggaaggtttcggacattggagccaaggtctgaag
ggctcaatgcaagacccgaagatgcaggtttacaaggatgacaaagtcgtagtaatcaaa
gataaataccccaaagctcgctaccactggctggtcctcccatggcagtccatttccagt
ctgaaggccttacgcgaggagcactgcaagctgatgaaacacatgcaacgggtcggtgag
cagatggttcagcagtgtccagatgcaagccggctacgcttccgcatggggtaccatgct
atccccagtttgagtcatttacacctccatgtgatcagccaagactttgactctccttgt
ttgaagaataaaaagcactggaactccttcacaactgactatttaatggactctcacgat
gtcattcagatgcttgaaacagatggaaaagtcacggtcaaagaaggaaccagtgagttg
ctgaaactacctctccgctgtcacgtgtgtcacagtgagattcccactataccggctctg
aaggaacacctgaagtctcactttcccagatga

DBGET integrated database retrieval system