Larimichthys crocea (large yellow croaker): 104930893
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Entry
104930893 CDS
T04659
Symbol
tnfrsf21
Name
(RefSeq) tumor necrosis factor receptor superfamily member 21
KO
K05157
tumor necrosis factor receptor superfamily member 21
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
104930893 (tnfrsf21)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
lco04050
]
104930893 (tnfrsf21)
04090 CD molecules [BR:
lco04090
]
104930893 (tnfrsf21)
Cytokine receptors [BR:
lco04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
104930893 (tnfrsf21)
CD molecules [BR:
lco04090
]
Proteins
104930893 (tnfrsf21)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
Death
Ephrin_rec_like
CARD
TNFR_ELAPOR1_6th
Motif
Other DBs
NCBI-GeneID:
104930893
NCBI-ProteinID:
XP_027140267
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Position
XI:23999025..24045762
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AA seq
698 aa
AA seq
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MPAMCVSAVLLYTVLAQLVSARVLTTNSPADQAVLSPRRYQHTDPDSGTQLDCDKCPAGT
YVSVHCSLAAVRECSPCPEGTFTRGENGVQQCHRCRPPCPAGFIEKAPCTATQDRICTCP
PNTFLSEAGGTECKPHSLCPPGTRVKKRGTQTEDVFCRPCTKGTFSGVKSNEMKCRTHTN
CQAQGLVLLTPGTKDSDNVCGPASTVSSSSSSVSITTLLVPAQAVHLQEPMTSSSSPSLS
LTEPAHKDTFSQSAAIQLKGNPGGKDHHVEGVLLSQSGSPTPPNLYPSRTSPLPARKQLM
DHEYQQGQPNSDPVPGPSKRAMEGLESAEIVRVGTGVSKVAGQGSGSGGGGVSSYYRPTR
RGSPRPSTHNDFDINEHLPWMIVLLLLLVLVVIVICSVKRSSRVLKKGPMQDPSSIMEKA
IQKKPSAPPKQVKEKWIYYSNGQGVDILKLVAAQVGTQWIDIYQSLANATEREVAAFSNG
YSSDHERAYAALQHWTIRDSDANLAKLINALHRQRRIDVVEKIRCVMEDNPQFDINQLMT
LVNVSQSLSPIHKPLESPSSTGTGSNNSSGGSVGGASGVGVEQSPVDRTKGFFPDESEPL
LRCDSTSSKDSALSRNGSFITKEKKDTVLRQVRLDPCDLQPIFDDMLHILNPEELHIIEE
IPAAEDKLDRLFEIAGVKSQEASQTLLDSVYSHLPDLL
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccatgtgtgtgtccgcagtgctcttatatacagtgttggctcagctggtctca
gcccgcgttttgaccacaaacagcccagctgaccaggctgtcctctctccccgccgttat
cagcacactgaccccgactcaggcacccagctggattgcgacaagtgcccggcaggcacc
tacgtgtcagtccactgctccctggcagctgtgagggagtgcagcccctgccctgaagga
accttcacacggggcgagaacggggtccagcaatgccatcgctgtcggcctccgtgtcct
gcgggcttcattgagaaagcgccctgcacagccacccaggaccgcatctgcacatgtccc
cccaacaccttcttgtctgaggctggtggcacagagtgtaagccccactcactgtgccct
ccggggaccagggtgaaaaagcggggcactcaaacagaagacgtgttctgtaggccgtgc
actaaggggactttctcaggcgtgaagtcaaatgagatgaagtgccgaacccacacaaac
tgccaagctcaggggctggtgttgctcacaccagggactaaagattcggataatgtctgt
ggacctgcatctacagtctcctcttcatcttcatctgtctccataaccaccctactggtg
cctgcacaggctgtgcatctacaggaacccatgacttcttcatcttccccatcattatca
ctgactgaacctgcacataaagacaccttcagccagtcagcagccattcaactgaagggt
aacccgggtgggaaagaccaccatgtagagggggtactcctcagccagtccggctctcct
accccgccaaatctttatccctctaggacttcaccgcttccagctcgcaagcaactgatg
gaccatgagtaccaacaggggcagcccaattctgaccctgtgccaggccccagcaagagg
gcaatggagggtctggagagtgcagagatagtcagggttgggacgggtgtcagcaaggtc
gccgggcagggaagcggaagtggtggaggtggggtatccagctactacaggcccactcgc
aggggatccccaagacccagcacccataatgactttgacatcaatgagcacctcccctgg
atgatagtgctgctgctcctgctggtattagtggtgattgtgatctgcagtgtgaagcgg
agctctcgtgtgctgaagaagggtcccatgcaggaccctagcagcatcatggagaaggca
attcagaagaaaccatcagcgcctccaaagcaggtcaaagagaagtggatctactactcc
aacggacagggggtggatatcctgaaattggtggcagcacaggtgggcacccagtggatc
gacatctatcagtcgttggccaatgccacagagagggaggtggccgccttctccaatggc
tactcatcagatcatgagcgggcatatgccgcgctgcaacactggactatccgggacagc
gacgccaacctagccaagctgatcaacgccctgcaccgacagcgtcgcattgacgtggtg
gagaagatccgctgtgtcatggaggacaacccacagtttgacatcaaccagctgatgaca
ttggtgaatgtaagccaaagcctcagtcccatccacaagccgctcgagtctcccagcagc
actggcaccggcagcaacaacagcagcggtggtagcgtgggtggggctagcggtgtgggt
gtggagcagtcgcctgtggaccgcaccaaaggcttctttcccgacgaatcggagcctctg
cttcgctgcgactccacctccagcaaagactccgccctcagcaggaacggctcgttcatt
accaaagaaaagaaagatactgtgctccgccaagtgcgcctggacccgtgtgacctacag
cccatcttcgacgacatgctgcacatcctgaacccagaggagctccacatcatcgaggaa
atcccagctgccgaggacaagctagaccgtttatttgagatagcaggagtcaaaagtcag
gaggccagccagacactgctggactcggtctatagccacctccctgacctgttatag
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