Larimichthys crocea (large yellow croaker): 104931373
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Entry
104931373 CDS
T04659
Name
(RefSeq) ATP-dependent RNA helicase DDX39A-like
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lco03041
]
104931373
Enzymes [BR:
lco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104931373
Spliceosome [BR:
lco03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
104931373
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
104931373
NCBI-ProteinID:
XP_019125128
UniProt:
A0A6G0HUU3
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All DBs
Position
XII:complement(28855330..28861971)
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AA seq
427 aa
AA seq
DB search
MAENDVDTELLDYEEDDEPQGAPESAAPAGKKEVKGSYVSIHSSGFRDFLLKPELLRAII
DCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCH
TRELAFQISKEYERFSKYMPTVKAAVFFGGLAIKKDEEVLKKNCPHIVVGTPGRILALTR
SKHLSLKNVKHFVLDECDKMLEQLDMRRDVQEIFRITPHEKQVMMFSATLSKDIRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYSKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCI
ALSQLLVEQNFPAISIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN
YDMPEDSDTYLHRVARAGRFGTKGLAITFVSDETDAKTLNDVQDRFEVNVAELPDEIDIS
SYIEQSR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaaacgacgttgacaccgagctgctcgactacgaggaagatgatgagcctcag
ggagcccccgagagcgcagcccccgcggggaagaaggaggtgaagggttcctacgtgtcc
atccacagctccggcttcagggattttcttctcaaaccggagctgctccgcgccatcatc
gactgcggttttgagcatccgtctgaagtccagcatgaatgcatcccacaagccatcctg
ggcatggacatcctgtgccaggccaaatctggtatgggcaagacggccgtgttcgtgctg
gccacactgcagcagatcgaacccgttgatggacaggtctccgtattagtcatgtgccac
acacgagagttggccttccagatcagtaaagagtacgagcgtttctccaagtacatgccc
acggtaaaggcagcggtgttcttcggcggcctggccatcaagaaggacgaggaggtgttg
aagaagaactgccctcacatcgtcgtgggaacgccgggtcgtatcctcgctctgacccgg
agcaagcacctcagcctgaagaacgtcaagcatttcgtcctggacgagtgcgacaagatg
ttggagcagctcgacatgaggcgtgacgtgcaggagatcttcaggatcacgcctcatgag
aagcaggtcatgatgttcagcgccacactgagcaaggacatccggccggtctgccgcaaa
ttcatgcaagatcccatggaagtattcgtggacgacgagaccaaactcacactccacggc
ctgcaacagtactactccaagctgaaggacagcgagaagaaccgcaagctctttgacctg
ctcgacgtgttggagttcaaccaggtggtgatcttcgtcaagtcagtccagcgctgcatc
gctctgtctcagcttctggtggaacaaaatttccctgccatttccatccacaggggaatg
gctcaggaggagaggctgtctcgctatcagcaattcaaggacttccaaaggcggatcctg
gtggctactaatctgtttggccgagggatggacatcgagcgggtcaacatcgtcttcaac
tacgacatgccagaagattctgacacctatttacacagggtcgcccgtgctggtaggttt
gggaccaaaggcttggctataaccttcgtgtctgacgagactgacgccaagactctgaac
gatgtgcaggaccgcttcgaggtcaacgtggccgagctgccagacgagatcgacatctcc
tcttacatcgagcagtccagatga
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