Larimichthys crocea (large yellow croaker): 104933388
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Entry
104933388 CDS
T04659
Name
(RefSeq) antigen peptide transporter 2
KO
K05654
ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:
7.4.2.14
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco02010
ABC transporters
lco04145
Phagosome
lco05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
104933388
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
104933388
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
104933388
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lco02000
]
104933388
Enzymes [BR:
lco01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
104933388
Transporters [BR:
lco02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
104933388
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_22
SMC_N
RsgA_GTPase
AAA_15
AAA_30
ABC_ATPase
AAA_29
Motif
Other DBs
NCBI-GeneID:
104933388
NCBI-ProteinID:
XP_027142425
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All DBs
Position
XIII:10573016..10577861
Genome browser
AA seq
718 aa
AA seq
DB search
MAHSTAIMRKVVTLILAVCVDLSLFYASGFEVIHRIFGHVTRIWVSAALRCLALTVVTGL
SLGELKPLLIRFITVHSLLPAVFETGTKVLYHEETQCGLLADMRCWLMGTGASLAAALFW
EMTIPDSDDAAAGKEKKQKSRELFVRVLHLYKPDYPLLLGGLVFLSLAVICEMFIPFYTG
RVIDILGSQYQQNEFISAVLFLGLYSLGSSVSAGCRGGLLMCAISAYTCRVKVKLFGALT
KQEIGFFETIKTGEITSRLSKDTNLMGRTVCLNVNVLLRTFIKTLGMISLMMNLSWKLTF
LVLMETPITGLIQNIYDTHYQRLSLAVQDSMARANEAANEAVSAIRVVRSFNTEKHEARR
YDRCLMVTHTLKTRRDTVRAVYLLARRLTGLVMQVSMLYYGRLFIRSGQMTTGNLVSFIL
YQSDLGQNIRTFTYIFGDMLNSVGAAGKVFEYLDRKPQVSTDGKLEPDQLTGHIIFRHLN
FSYPAYPNKTVLQDFSLELKSGQMTALVGPSGEGKSTCVSLLERFYEPQEGEILLDNEPL
KSYEHRFLHKKIAVVNQEPVLFSGSIRDNITYGLPDCSIDEIQEAARKANAHDFINKLEK
GYDTEVGEGGGQLSKSERQRIAIARALVRKPQVLILDEITSSLDAESENKVQEALASCPN
QTLLVIAHRLKTIEKADQIVLIGDGRVQERGTHQELMDRKGSYYKLREKLFTEGNSPQ
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggcacacagcacagcaataatgcgcaaagttgttactttgattttagccgtttgcgtg
gacctttccttgttttacgcatcgggatttgaggtgattcaccgtatttttgggcatgtt
acgcgcatttgggtgtctgcggctcttcggtgtttggcactgactgttgttactgggctc
agcctgggagaactcaaaccgttgctgattcgctttataacggtgcacagtctgctaccc
gcggtgtttgagaccgggaccaaagtgctgtaccatgaggagacgcagtgtggcttattg
gcggatatgcgctgctggctgatggggaccggtgcgtcgctggctgctgcactgttttgg
gaaatgaccatcccggacagcgacgatgcggccgccggtaaagagaagaagcagaaatcc
agagagctgtttgtgagagtcctccacctgtacaaacctgactatccactactgctcggg
gggcttgtgttcttgtcattggctgttatctgtgagatgttcatccctttctacactggg
agagtcattgacatccttggcagtcagtaccagcagaatgaatttatatctgcagtcctc
ttcttgggcctgtactctctgggaagttctgtgagtgcaggctgcagagggggtctctta
atgtgtgccatcagtgcctacacatgcagagtgaaagtcaagctgtttggggctctgacc
aaacaggaaattggattctttgagaccattaagacaggtgaaattacatccaggttgtct
aaagacaccaacttgatgggaagaacagtgtgtctgaatgtcaatgtgctgctgaggaca
ttcatcaagacactgggcatgatctccctgatgatgaatctttcatggaagctcaccttc
ctcgtattgatggagacgcctatcaccggtctcattcagaacatctatgacacacactac
cagaggctgtcccttgcagtgcaggactcaatggctcgggcaaatgaagctgcgaatgag
gcagtgtccgctattcgtgtggtacggagctttaacacagaaaaacacgaggcccgtcgc
tatgatcggtgcttgatggttacacacaccctcaagacacgccgggacactgtcagggct
gtatacctgctcgctcggaggttgacagggttggtcatgcaggtctccatgttgtactac
ggcaggctgttcattcggagtggacagatgaccactggcaacctggtttccttcatcctc
taccagtcagaccttggacaaaacatcaggacattcacttacatctttggtgacatgctg
aactctgtgggggctgctgggaaagtgtttgagtacctggaccgaaaacctcaggtcagc
acagacgggaaactcgaacctgatcagctgacaggacacatcatcttccgccatctcaac
ttctcctatcctgcataccccaacaaaacagtgctgcaggacttttctttggagctgaag
tcgggtcagatgacggcactggtgggtccatctggagaaggaaaaagcacctgtgtgagt
ctgctggagcgattctacgaaccacaggaaggagaaatcctattggacaatgaaccactg
aaatcctatgagcaccgtttcctccacaagaagattgcagtggtgaaccaggagcctgtg
ctcttctctggctccatcagagataatatcacctacggacttcctgactgctccatagat
gagatccaggaagcagcacgcaaagccaacgcccatgacttcatcaacaagttggagaag
ggctacgatacagaggtgggtgagggtggtggccagttgtcaaagagtgagaggcaacgc
atcgccattgctcgagctctggttagaaagccacaggtcctcattctggatgaaataacc
agctctctggacgctgagagtgaaaataaggttcaggaagccctggctagttgtcccaac
cagacgctgctggtgatcgctcacagactgaagaccattgagaaggcagatcagatcgtt
ttgattggtgacggcagagttcaggagcggggaactcaccaggaactgatggacaggaag
ggaagctactacaaactgagagagaagctcttcactgaaggaaactcaccacaatga
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