Larimichthys crocea (large yellow croaker): 104935494
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Entry
104935494 CDS
T04659
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent L-type calcium channel subunit alpha-1D
KO
K04853
voltage-dependent calcium channel L type alpha-1F
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04010
MAPK signaling pathway
lco04020
Calcium signaling pathway
lco04260
Cardiac muscle contraction
lco04261
Adrenergic signaling in cardiomyocytes
lco04270
Vascular smooth muscle contraction
lco04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
104935494
04020 Calcium signaling pathway
104935494
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
104935494
09153 Circulatory system
04260 Cardiac muscle contraction
104935494
04261 Adrenergic signaling in cardiomyocytes
104935494
04270 Vascular smooth muscle contraction
104935494
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lco04040
]
104935494
Ion channels [BR:
lco04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
104935494
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CAC1F_C
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
104935494
NCBI-ProteinID:
XP_027131448
LinkDB
All DBs
Position
Unknown
AA seq
2080 aa
AA seq
DB search
MYEERKSSGRNGYAKTVEGEEGGGEGEEEEEEGGEGDEGGEERDTEWDEELDGGSEGGMR
MTRTDTLHSTTSSTGTQRRRGQHAKKQVQGSNQVQRAPRALFCLKLNNPIRRAALSIVEW
KPFDIFILLAIFANCVALGVSKPFPEDDSNSTNHDLEQVEYVFLIIFTVETFLKILAYGL
VMHPSSYIRNGWNLLDFVIVIVGLFSVILETMTHKSGEQATTHHVPGKPGGLDVKALRAF
RVLRPLRLVSGVPSLQIVLNSIMKAMVPLLHIALLVLFVIIIYAIIGLELFIGRMHRTCY
YLGTDNYVEDDPVPCAFAGHGRQCVINGSECRGRWDGPNGGITNFDNFFFAMLTVFQCIT
MEGWTDVLYWMNDAIGFELPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDF
QKLREKQQMEEDLCGYMDWITQAEDMDELDEDGNPRPCLGDLSDKKRGKFGWFSHSNETH
ASLPASETASENTVNIDEEHTNCCQACCSKMMKISCCRTLRRWNRVCRRNCRTAVKSVTF
YWLVLLLVFLNTSLSASEHYNQPEWLTQVQDIANKVLLSLFTVEMLLKMYSLGLAHYFVA
FFNRFDCFVVCGGIMETILVELEIMPPLGISVLRCVRLLRIFKVTRHWTALSNLVASLLN
SMKSIASLLLLLFLFLIIFALLGMQLFGGKFNFDETQTKRSTFDAFPQALLTCFQILTGE
DWNVVMYDGIMAYGGPVFPGMIVCVYFVILFICGNYILLNVFLAIAVDNLAGGDGDDKKK
DKKTEGAEEEEAEEEEEEGGEVKVDIDEDTEYEEEEEGGEGEDDGGVQLKMADLTPPKEK
ILPIPEGSAFFCLSKTNPIRVGCHTLIHHHIFTNLILVFIILSSCSLAAEDPIRAHSFRN
NILGYADYAFTSIFTVEILLKMTVHGAFLHQGSFCRNWFNLLDLLVVSVSLVSFFLHSSA
ISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMFACIGVQL
FKGKFYRCTDEAKHTPEQCKGTFVVYKDGDVTHPMVRERIWQNSDFNFDNVLMGMMALFT
VSTFEGWPALLYKAIDANGENSGPIYNYRVEISIFFIVYIIIIAFFMMNIFVGFVIITFR
EQGEQEYKNCELDKNQRQCVEYALKAQPLKLYIPKNPVQFKFWSIINSTGFEYVMFVLIL
LNTVTLAVQHYEQSKDFSHVMDILNMVFTGLFTVEMLLKLLALRLRHYFVDAWNSFDALI
VVGSVVDIVVTEFSSGEDSSRVSITFFRLFRVMRLVKLLSKGEGIRTLLWTFIKSLQALP
YVALLIAMIFFIYAVIGMQTFGKIAMQDYTQINRNNNFQTFPQAVLLLFRCATGEAWQEI
MLASLPGKRCDPESDHEPGEEFTCGSNFAIVYFISFFMLCAFLVHNHMITXPHDHLTTXP
HDHLTTXPHDHMITXPHDHMCLQXSVLLLLPLRGRIKHLDVVALLRRIQPPLGFGKLCPH
RVACKRLVAMNMPLNADGMVTFNATLFALVRTALKIKTEGNPDQENEELRVIIKKIWKRM
KPKLLDEVIPPHEEEEVTVGKFYATFLIQDYFRKFRKRKEKGDLTGENDNTNPSAVQLCK
AGLKTLQDLGPEMRLALNEDLEEDEEVMMEEQELEENAAFKGENGFGPEKDQRGSILTTP
TGPGGVVGFGGVSNGGLIHRVGSLTKMPDSISEHDEHLRRGDNVRSSVNHHHGRRPSVKN
SLLDHAHKRPSYYKHGRRDSRDSRDSRDRYWRNGDMEAHGEQGYYSREDDNDSITSRDRD
HYDGHAPYSNGSYGGYSEGGRTTRRRLLPATPTGRKPSFNIQCLRRQGSSDDLPIPGTYH
PTSPPRRTRTQQTFSSYESRHSSGLSSAASSASWANPCPRRGRLLYAPLILVEEEGSPPW
GGGAGEGGGEGKKGGAGRGVSVTGAAPRPAWYGGPAGSSAPPPYRAYTTLRVPSQLGAPL
TEKRGSADSLVEAVLISEGLGLYARDPKFVAFAKREIADACHMTVDEMESAASDLLGTGS
HGLLASTAADPSALYSDEEPIRTGRDEEELADEMTCVTSF
NT seq
6243 nt
NT seq
+upstream
nt +downstream
nt
atgtacgaggagaggaaaagttctggtcgtaatggctacgccaaaacagtggagggggag
gagggaggaggtgagggtgaggaagaggaggaggagggaggagagggggatgaaggagga
gaggaaagagacacagagtgggacgaagagttggacggaggaagcgaaggaggcatgagg
atgacgaggacggacacgcttcattcaactacgagttcaaccggaacacagaggaggaga
ggacaacacgctaagaaacaggtgcagggcagtaaccaggtgcagcgagctccccgagcg
ttattctgtctgaagctcaacaatccaatcagacgagccgctctctctattgtcgagtgg
aaaccattcgacatcttcatcctgttagccatctttgctaactgtgtcgctctgggagtc
tctaaaccgtttcctgaggacgactccaactccaccaaccacgacctggaacaagtggag
tacgtcttcctcatcatctttactgtggaaacattcctcaaaatcttggcctacggtctg
gtgatgcacccgagctcgtacatccgcaacggctggaaccttcttgactttgtcatcgtc
atcgttgggttattcagtgtcattttggagacgatgactcataaatctggcgagcaggcg
accactcatcatgtgcccggtaaacctggaggtctggatgtcaaagctctgagagccttc
agagtgctgaggcccctcagactggtttctggagtccccagtctgcagatcgtgttgaac
tccatcatgaaggcgatggtccctctgctccacatcgctctgctggttctcttcgtcatc
atcatttacgccatcatcggtctggagctcttcataggacgcatgcaccgcacctgctat
tacctcggaacagataattacgtggaggacgacccggtgccgtgtgcattcgccggtcac
ggccgtcagtgcgtgattaacggctccgagtgtcgcgggaggtgggacggtcccaacgga
ggaatcaccaactttgacaacttcttcttcgccatgctgacggtgttccagtgcatcacg
atggagggctggaccgacgtcctgtactggatgaacgacgccatcggcttcgagctgccg
tgggtgtacttcgtcagtctggtcatcttcggatctttcttcgtcctgaaccttgtcctg
ggagtcctcagcggagagttcagtaaggagagggagaaggcgaaggctcgtggagatttc
cagaagctgagggagaagcagcagatggaggaggacctgtgtgggtacatggactggatc
actcaggctgaggacatggacgagctcgatgaggacggaaacccacgtccgtgtctcggc
gatctgtccgataagaaaagaggaaagttcggatggttcagtcactccaatgaaactcat
gcgagtctccctgcgagtgagacagcgtctgagaacacagtgaacatcgatgaggaacat
acaaactgctgtcaggcgtgctgctcaaagatgatgaagatcagctgctgtcggacgttg
cgtcgctggaatcgagtctgtcgcagaaactgtcgcaccgccgtcaaatcggtgacattc
tattggctggttctcctgctcgtcttcctcaacacctccctcagcgcctccgagcactac
aaccaacctgagtggctgacacaagtccaagacatcgccaacaaggtgctgctgtctctg
ttcaccgtggagatgctgctgaagatgtacagtctgggactggctcattatttcgtggcg
ttctttaaccgcttcgactgcttcgtggtgtgcggcggcatcatggagaccatcctggtg
gagctggagatcatgcctcctctgggcatctcggtgctgcgctgcgtccgcctgctgagg
atcttcaaggtgacacgccattggacagctctgtccaatctggtggcgtcgctgctgaac
tccatgaagtccatcgcctccctgctgctgctcctcttcctcttcctcatcatcttcgct
ctgctcggcatgcagctgtttggagggaagttcaacttcgacgagacacagaccaaacgc
agcaccttcgacgcctttccgcaggcgctgctcacctgcttccagatcctgacaggtgag
gactggaacgtggtcatgtatgacggcatcatggcgtacggcggccccgtgttcccaggc
atgatcgtgtgtgtttacttcgtcatcctcttcatctgcgggaactacatcctgctgaat
gtgttcttggccatcgccgtggacaacctggcaggaggagacggagacgacaagaagaaa
gataagaagacagaaggagccgaggaggaggaggccgaggaggaggaggaggaaggagga
gaagtgaaggtggacatcgacgaagacaccgagtatgaggaggaagaggagggaggagaa
ggagaagacgacggaggagtccagttaaagatggccgacctgacgccgcccaaagagaaa
attctaccaatcccagaaggcagtgcgtttttctgcctcagcaagaccaaccctatccgt
gtgggctgtcacactctgatccaccaccacatcttcaccaacctcatcctcgtgttcatc
atcctgagcagctgctcattggccgctgaggatccaatcagagcgcactccttcaggaac
aacatcctgggttatgcagactacgccttcacctccatcttcactgtggagattctgtta
aagatgacggttcacggagcgttcctccatcagggctcgttctgcagaaactggtttaac
ctattggacctgctcgtcgtcagcgtgtcgctcgtctccttcttccttcactcgagtgcg
atctctgtggtgaagattctcagagttcttcgagttcttcgacctctgagagcgatcaac
agagccaaaggactcaagcatgtggtccagtgtgtgtttgtggccatcaggacaatcgga
aacatcatgatcgtcacgactctgctgcagttcatgttcgcctgcatcggagtgcagctg
ttcaagggtaaattttatcgctgcactgatgaagccaaacacactcctgaacagtgcaaa
gggacctttgtggtctacaaagacggggacgtgacccatccgatggtccgagagcggatc
tggcagaacagcgactttaactttgataacgtgctgatggggatgatggcgctcttcacc
gtctccaccttcgagggttggcctgctctgctgtacaaagctattgacgctaacggagag
aactctgggcccatctacaactaccgggtggagatctccatcttcttcattgtctacatc
atcatcattgccttcttcatgatgaacatcttcgtgggtttcgtcatcatcacgttcaga
gagcagggcgagcaggagtacaagaactgtgagctggacaagaaccagcgtcagtgtgtg
gagtacgctctgaaggctcagcctctcaaactttacatcccgaagaacccggttcagttc
aagttctggtccatcatcaactcgactgggttcgaatacgtgatgttcgtgctcatcctg
ctgaacaccgtcactctggctgttcagcactacgagcagtccaaagacttcagccacgtc
atggacatcctgaacatggtgttcacggggctgttcacggtggagatgctgctgaagctg
ctcgcgctcagactcaggcattacttcgtcgacgcctggaactcgttcgacgctctgatc
gtggtcggcagcgtcgtcgacatcgtcgtcacagagtttagtagtggtgaggacagctct
cgggtgtcgatcacgttcttccgtctgtttcgagtgatgcgattggtcaagcttctgagt
aagggggaggggattcgcacgctgctgtggacgttcatcaaatccctgcaggcgctgccg
tacgtcgctctgctcatcgccatgatcttcttcatctacgccgtcatcgggatgcagacc
tttggaaagatagcgatgcaggattacactcagatcaacaggaacaataacttccagacg
tttcctcaggccgttctcctcctcttcaggtgtgctacaggtgaggcgtggcaggagatc
atgttggccagccttccaggtaaacgctgcgaccccgagtccgaccacgagccaggagaa
gagttcacctgtggcagcaacttcgccatcgtttatttcatcagcttcttcatgctgtgt
gctttcctggtacacaatcacatgatcacctgaccacatgatcacctgaccacatgacca
catgaccacctgaccacatgaccacatgatcacatgatcacctgaccacatgaccacatg
tgtttgcagtaatcagttcttcttctcctgcctctcagaggtcgtatcaaacacctggac
gtcgtggcgttgctcaggaggattcagcctccgttgggttttggtaaactttgtccgcac
agagtggcctgtaagcgtctggtggcgatgaacatgcctctgaacgccgacgggatggtg
accttcaacgccacgctcttcgctctggttcgcaccgccctcaagatcaagactgaaggt
aaccctgaccaggagaacgaggagctgagggtgatcatcaagaagatctggaagaggatg
aaaccaaaactactggacgaagtaatcccaccacatgaagaggaggaagtgacggtcggg
aagttttacgcgacattcctgatccaggattatttcaggaagttcaggaagaggaaggag
aaaggagacctgaccggagagaacgacaacaccaacccatctgctgtccagctgtgtaag
gctggtctgaagactctgcaggatctgggtccagagatgcgtctggctcttaacgaggac
ctggaggaggacgaggaggtgatgatggaggagcaggagctcgaggagaacgctgcgttc
aagggtgaaaatggatttggaccagagaaagaccaacgaggctccatactgaccacgccc
acaggtcctggtggtgttgtcgggtttggcggcgtgtctaacggagggctgatccaccgg
gtcggttctctcaccaagatgccggacagcatcagtgaacacgacgaacaccttcgccgt
ggagacaacgtgaggtcatctgtcaatcatcaccatggccgccgcccatcagtgaagaac
agcctgctggaccacgcccacaagagaccgtcgtactacaaacatggccggcgggactcg
agagactcgagagactcaagggaccggtactggaggaacggggacatggaggcacacgga
gagcaaggttactacagccgagaggacgacaacgacagcatcacctccagagacagagac
cactacgatggccacgccccctactccaacggtagctatggtggctacagcgagggaggg
aggacgacccggagacgcctacttcctgccacgcccacaggtcgtaagccgtcgtttaac
atccagtgtctgaggcggcagggcagcagtgacgacctgccgatccctgggacgtaccac
cctacctcaccgccacgccgtacacgcacacagcaaaccttcagtagttacgagtctcgt
cactcctccggtctctcatcggcggcctcctctgcttcctgggcgaacccgtgtcctcgc
cgtgggcgcctcctctatgctcctctcatcctggtggaggaggaaggaagcccaccctgg
ggaggaggagcaggggaaggaggaggagaggggaagaagggaggggcaggaagaggtgtc
agtgtgacaggtgcagcacccagaccggcgtggtacggtggccctgcagggtcctcagct
ccgcctccgtacagggcgtacaccaccctcagagttccctcgcagctcggcgctccgctc
accgagaaacgaggatcagctgacagtctggtggaggcggttctgatctccgagggactc
ggcctgtatgctcgggatccaaagttcgtggcgttcgccaaacgggagatcgctgacgcg
tgccacatgaccgtggacgagatggagtcggctgcaagcgacctgctcggcacagggagc
catggtttactcgccagcaccgccgccgacccctccgcactctacagcgacgaggagcca
atcaggacggggcgcgacgaggaggagctggccgacgagatgacctgcgtgacatcattc
tga
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