Larimichthys crocea (large yellow croaker): 104935526
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Entry
104935526 CDS
T04659
Name
(RefSeq) caskin-2 isoform X1
KO
K21952
CASK-interacting protein
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
104935526
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
104935526
Membrane trafficking [BR:
lco04131
]
Exocytosis
Calcium ion-dependent exocytosis
Kinases and associated proteins
104935526
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
SAM_1
Caskin-Pro-rich
Ank
Caskin-tail
Ank_4
SAM_2
Ank_5
Ank_3
Caskin1-CID
Ank_KRIT1
SH3_2
SAM_TNK
SH3_9
SH3_1
Motif
Other DBs
NCBI-GeneID:
104935526
NCBI-ProteinID:
XP_027145439
LinkDB
All DBs
Position
XVI:complement(2525845..2583185)
Genome browser
AA seq
1485 aa
AA seq
DB search
MGKEQDLLVAVKSGDLLLAHKLLSKVKCNKTKLLGSTKRLNINYQDSDGFSALHHAALTG
TTELLSLLLEAQATVDIKDINGMRPLHYAAWQGKADSVLLLLRAGASVNSPSLDGQIPLH
LSAQYGHYEVSEMLLQHQSNACLMNKAKKTPLDLACEFGRLKVAQLLLSSNMVAALLEGD
GGHDSLDSATTTPLHLAARNGHKDIIKLLLKAGIDINRATKAGTSLHEAALYGKTEVVRL
LLDAGINVNMRNTYNQTALDIVNQFTTSTASREIKQLLREASSSLQVRAVKDYWNLHDPT
ALNLRAGELIMVLEQHSDGRWKGHIHDTQRGTDRVGFFPPSVVEVLSRRAGGTLSRQASM
PCQRQHFASRAPLSSHGSAPQTDDSYTHGYDPTGAPPDSQLSAPARPASPTQDIWVLRRS
PTGDRNSVGSAGSVGSSRSAGSGQSSESGHKQNGTQNRHNADSAKLAPSAGESGDHLHIA
AADHSKQADGTAGGSRRQVNGTPQKGFMRPEHLLEGKDSEAIYQWLCEFQLEQYTSNFIS
AGYDVPTISRMTPEDLTAIGVTKPGHRKKISMEIAKLSIPEWLPDYIPSDLGEWLSVIGL
PQYQKRLCDNGYDSITIVKDITWEDLQEIGITKLGHQKKLMLAVKRLCDLQRSRNHADRA
GGGTLQRKPPAALELVAIEHIRSDTPSDDCCPSPRTPKALLSFQDSELSAELQSAMMGRV
GGGGAEAFGIRGVTSAAVISAMSVSQESISMRSRGSGNSGNSGNSNLGYSQDHQAAPSSA
RTASRSEESLGSGAGEEAKHGESSPGGRSRQRPTEMWDHHSRSATPNKLPFSPLTPPLTP
SKMPRFAYPAVPPKAKHFQSPNRLYQPQHHPPSSPSPPSPQPSPTQKAFSYLGAQTVAIN
GGPRVLPKPLPGAVPLLGPRQGQDRTNDTQKGPHKKRAQSLTRYALSDGEPDEDDDLAPP
STSSSSSAAMPSYATLSRRPGRGHTSTAGTQRHINRSHSFAVRSRRKGPPPPPPKRMSSV
SGSPVHQMGNGKVVEAEVKGAVEMESTGSVRSIAARLEGSSSSPSKRIDIPPTHIPVSPV
FSPVSCPFPPGISPHSGLQHSKPVPVLGVGGLRRTGSERTDVEAGRHRGGGTDGSFEERE
KTKKSERTSKSASPSPKHTSGGHLPFAEEGNLTIKQRPRISVVTQPEAELKSPPEGPIQT
PNSLELPEFNLKESDTVKRRKPKDSSTPEEATPSRDDNHSRTNSLHNDASTPSDNESQRP
GNVFQRVGSMGKGPKPPVSSKPCSPFKQPPTIPQKTMSSVPSSAQTSIPKLTSVQIHTVS
PKLGGSVHTQTCIPSPKPVKHQQNVMSMPESLQKASGLPVSRLPQPSTASASTTGPNFTV
AQSIAFAAPSSPAPVPSHPTSALPCQAGKPGTPLPGGSGLEVLAQKRLEQTSTSLEAALK
VVENKLAEGGNVDGGSSTVKAAGNILDDIGNMFDDLADQLDAMLE
NT seq
4458 nt
NT seq
+upstream
nt +downstream
nt
atggggaaagaacaggatctgctggtggcggtgaagagcggagatcttctgctggcacac
aaacttctctccaaagtcaagtgcaacaaaaccaagttgctgggctccaccaagagactc
aacatcaactaccaagactcagacggcttctcagcgctgcaccatgctgctctgacgggc
accaccgagctgctgtctctgctgctggaggcccaggccacggtggatatcaaggacatc
aacggcatgcgtcccctccactacgcagcatggcagggtaaagcagactctgtcttattg
ttgctgagagccggagcttcagtcaactccccttctcttgatggacagataccgttacat
ctctctgctcagtatggacactatgaggtgtcggagatgttgctgcagcaccagtcgaat
gcctgcctgatgaacaaggccaagaagactcctctagatctggcctgcgagtttggaagg
ctgaaggtggctcagttgctgttgagcagcaacatggtggctgcacttttagaaggggat
ggagggcacgacagcctcgactctgcgaccaccactcccctccacctggcagccaggaac
ggacacaaagacatcatcaagttgctgctcaaagccggtatcgacatcaacagagccacc
aaagctgggacgtctctgcacgaggccgccctctacggcaaaactgaagtcgtgcggcta
ctgctagatgcgggcatcaacgtgaacatgcgcaacacgtacaaccagacggctctggac
attgtcaaccagttcaccacctccacagccagcagggaaatcaaacagctgctgagagag
gcatcaagctctctccaggtcagagcggtgaaggactactggaacctccatgaccccacc
gctcttaacctccgggctggagaacttattatggtcttggagcagcactcagacggacgc
tggaaagggcacatccatgacacccagcgggggacggaccgggtgggcttcttcccccct
tcagttgtggaggtcctcagcagacgagcagggggcactctctcccgccaagcctcaatg
ccttgccaacgacaacactttgcatccagagctcctctctcaagccacggctccgcccct
cagactgacgactcatacacccatggctatgatcccacaggtgctccacctgacagtcag
ctctcagccccagctagacccgctagccccactcaggacatttgggtcctcaggaggtct
cccaccggtgacagaaacagtgttggcagtgctggcagtgtgggcagcagccgcagtgcc
ggtagcggccagagctcagagagtggccacaaacagaacgggactcagaatcgccacaat
gctgacagtgccaagcttgctccctctgctggtgaatcaggagatcatctccacattgca
gcagcagaccacagcaaacaggcagatggaactgcaggtggttcccgtcggcaggtcaac
ggcactcctcagaaaggattcatgaggccagaacatcttctggagggcaaggactctgag
gccatctaccagtggctgtgtgagttccagttggagcagtacacgtccaacttcatcagt
gcaggatatgatgttcccaccatcagcaggatgaccccagaggacctgacggccatcgga
gtgaccaaaccaggtcacagaaagaagatctcaatggaaattgccaagctgagcatccct
gagtggctgcctgactacattccttcggacctcggggagtggttgagtgtgattggattg
cctcagtaccagaagaggttgtgtgacaatggctatgactccatcactattgtcaaagac
atcacctgggaggacctgcaggagataggcatcaccaaactgggccatcagaagaagtta
atgttagcagtgaagagactttgtgacctgcagcgctcacgtaaccatgccgacagagct
ggaggtgggactctccaacggaagccccctgctgctctagagctggtggccatcgaacac
attcgctctgacactccttctgacgactgctgcccctctcctcgcacccccaaagccctc
ctctccttccaggacagcgagttgagcgccgagctgcagagtgctatgatgggcagggtg
ggcggaggaggtgccgaggcgttcggcatcaggggcgtgacttctgctgcagttatatct
gccatgtcagtgagtcaggagagcattagcatgcgatcgcgtggatcagggaattcgggg
aattccggaaattcgaatttaggatattctcaagatcatcaagcggcaccatcttcagcc
aggacagccagccggtcagaggagagtctggggagtggtgcaggggaggaggccaagcat
ggagaaagcagtcctggaggcagaagtaggcagagacccacagagatgtgggaccaccac
agtcggtctgctacccccaacaaactacccttctcccccctgacacctccactaaccccc
agcaagatgcctcgctttgcctacccagctgtcccacccaaagccaaacacttccagtca
cccaaccgcctctatcagcctcagcaccacccgccctcctccccttcccctccatctccg
cagccttcccccacacagaaggctttcagttacctcggtgcccagacagtggccatcaat
gggggtccacgggtgctccccaagcctctgcctggagctgtccccctgttgggaccccgt
caaggacaggaccgaactaatgacacccagaaaggtccccacaagaagcgtgcccaaagc
ctgactcgttatgctctgtctgatggtgaaccagatgaagacgacgacctcgctcccccc
agtacctcttcttcttcttctgctgccatgccctcctatgccaccctgtcacgcagacca
ggacgcgggcacacgagcaccgcagggacccaacggcacatcaaccgcagccactcgttt
gccgtgcgatcccgacgcaaaggcccaccgccgccgcctcccaagaggatgagctcggtt
agcggcagcccggtgcaccaaatgggaaacgggaaagtggtggaggcagaggtaaaagga
gcggtggagatggagagcacaggcagcgtgaggagcatcgcagcgaggttagagggaagc
agcagcagtccatccaagaggatagatattccaccaactcacatcccagtgtcacctgtg
ttcagccccgtttcctgcccgtttccacctgggatctctccccacagtggcctccagcac
tccaaacctgtccctgttctgggcgtggggggcctgaggaggacaggaagtgagaggaca
gatgttgaggctggcagacatagaggtggaggcacagacggaagctttgaagagagagag
aaaacgaagaaaagtgaaagaacatcgaagagtgcttctccatctccaaagcacacctcc
ggtggccacctcccattcgccgaagaaggcaacctcaccatcaaacagcggcccaggatc
tcagttgttactcaaccagaagctgaattaaagagtcctccagagggtccaatccagacc
ccaaacagcctggagctgccagagttcaacctgaaagagtccgacacggtaaaaagacgc
aaacccaaagactcgtcgacacccgaggaggccacccccagcagagacgacaaccactca
cgtaccaacagtctccataatgatgccagcacgccaagcgacaatgaatctcagcggccg
gggaatgtgttccagagagtaggctccatggggaaaggcccaaagcctccagtgtcctcg
aaaccctgcagtcctttcaaacaaccgcctacaatcccccagaaaacaatgtcttcagta
ccatccagtgcacaaacatccattcctaaacttaccagtgtacaaattcacacggtctct
ccaaagctgggtggcagtgtacacacacagacatgcatacccagtcccaaacctgtgaaa
caccaacagaacgtgatgtccatgccagagagtctgcagaaagcttctggtttacctgtt
tcaagactccctcagcccagcacagcctcggcatcaacaacaggaccaaacttcaccgtt
gctcagagcattgcgttcgctgctccgtcctccccagctcccgtcccttcacacccgacc
tcggcactaccgtgtcaggcaggaaaacctgggacacccttgcctggtgggtctggtctg
gaggtgttggctcagaagagactggaacaaaccagcacgtcactggaggctgctctcaag
gtggtggagaacaaactggcagagggtggcaacgtggatggcggcagcagcacagtgaag
gcagccggaaacattctggatgacatcggcaacatgttcgacgacctggctgaccagctg
gacgccatgctggagtga
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