Larimichthys crocea (large yellow croaker): 104936846
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Entry
104936846 CDS
T04659
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1I isoform X1
KO
K04856
voltage-dependent calcium channel T type alpha-1I
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04010
MAPK signaling pathway
lco04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
104936846
04020 Calcium signaling pathway
104936846
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lco04040
]
104936846
Ion channels [BR:
lco04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
104936846
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Nucleo_LEF-12
Motif
Other DBs
NCBI-GeneID:
104936846
NCBI-ProteinID:
XP_027130304
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Position
XXIV:complement(9234093..9249429)
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AA seq
1308 aa
AA seq
DB search
MVLLSCAVACMYKPYKEPSDLLKISERVTFIFFIVEMLIKMVALGLFGHRQSYLSNNWNK
FDFLINSVHVVDYLLAFCGINWQISKPLEPLRLIGRIPSMRGLMKVLLDMAPMILNVFFL
YVFIIIVFAIVGVQLWAGQLRNRCFLGEDIIGKYNVSISPYYKPKDKYVFICSPDGLHGA
RRCSNVPPYMQNGKVCSLAAPDHALAANHSLLTAGGVSADACVNWHMYYNVCRPGIHNPQ
RGAINFDNIGYAWLTTFQVVMLEGWTEIMFYVMDAYCFWSFIFFIPVTIMGSFIMMNVCA
VVIVNQFSKSTQRDKGKPPAAAASIAWLCDKLASCLRVISSKYNSRRRSAEHPSDSGSME
SSFMVHIWMPVKRRLECIVNSTLFNEVIVFAILFSVVTLAVEHHGQPKAFTRILQVTNLV
FVIIFIVEVAMKLLVLSGAYFWDPNNVFDFFIVISSVWELIAKADSRLSILRAFRLLRFV
RLVKSHPHLKRQLLVLKRTIEEAVVLCGLLLVGMLVFSLLGMQLFGNKFNFQTKDGVTFT
DRKNFDTILWSMVTVFQILTPDHWNLVLYNGMAATSPWAALYFVGLILFGKNIILNILMG
IVVESFQERRSSSALSSCADLTHLTPSGEGDNEENFQHAISGDCSPSGLRPSRSTEINTE
EETDTNERSLSLIQRVLRWCKEHEDWSLYILSPQNRLRVCCQRVMSHTMFDHVVLCFILL
NCITIAMERPGIAPKSVERQIIDTSCYVFSTIFMIEMFIKVLALGLVFGKESYCHSPWNT
MDGLLVVLSLVHALVSLASSGMKKKLGILKVLRLLRALRPLRVIKRAPKLKLAVEALIAS
VKPIGNIVLICCTFFLFYGILGVQLFKGKFFYCAGKDTRNITSRSECLSANYQWVRKTYN
FDNLPQGLLTLFVMFSKDNWVSIMHDGLDAVGVNKQPVQNYNEWMLLFFISFMAISFVLL
DMFIGVMVETFYQCQQKQKIQNRLLQEEEAAMRGGEMQVQEPERPYYTHYSPMRRSIYDL
CVSDFLDYFMTAIVFISVLMMAFEHYNEPEYIERFVEYSYYVFTAILVMEVLLKLVGFGV
LRFFTIGWNLLDIVVALISVISIVLEKTFLKVLPFNPSILRVCRVLRLAQVLKAKKIRLL
LKTIIKTIAQVENIILLFAFFFFIYAVLGVELFGRLSCSDDNPCYGLHRHANFKHFGMAL
LTLFQVCTGDNWSGIMKDTLRSCRPGDSGCLSYLHWVSPICFTSFVVMGQFVLANLVVAA
IMQALEDSNELQSKTIYLPSQEGHDACLQDGEVDEEEENWFEATSSLK
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
atggtgctactcagctgtgccgtcgcgtgcatgtacaagccctataaggagccctcagac
ctacttaagatctcggagcgtgtaacgttcatcttcttcatagtggagatgctcataaag
atggtggccctgggactctttggtcatcgacaaagttacctaagcaacaattggaacaag
tttgacttcctaatcaactctgtgcatgtggtagattatctgctggctttctgcggcatc
aactggcagatctctaaaccgctggagccattgcgtctgattggtagaataccgagtatg
cgaggcttgatgaaagtcctcttagacatggcgcctatgatcttaaatgttttcttcctc
tacgtcttcatcatcatcgtctttgccattgtgggagtccaactgtgggcagggcagctt
cgcaatcgctgcttcctgggagaggacattatcgggaagtacaatgtgtccataagtcca
tactacaagcccaaggacaaatacgtgttcatctgttcacctgacggcctgcacggggcg
cggcgctgcagtaatgtaccaccttacatgcagaatgggaaagtctgctcactggctgct
cccgaccacgctttagctgcaaatcactccttactgacggccggtggtgtcagtgctgac
gcgtgcgttaactggcacatgtactacaacgtctgtcgccctgggattcacaaccctcag
aggggagccatcaacttcgataacatcggctacgcctggttgaccacattccaggttgtc
atgctggagggatggacagagattatgttttatgtcatggacgcttattgcttttggagt
ttcatctttttcataccggtcaccattatgggctccttcatcatgatgaacgtgtgcgcg
gtcgtcatcgtcaaccagttctcaaaaagcacacagagggataaaggaaagccgcctgct
gctgctgcgtccatcgcatggctctgtgacaagttggcctcctgtctgcgggtcatctcc
tctaaatacaacagtaggcgacgcagcgcggagcatcctagcgacagcggcagcatggag
agttcctttatggttcacatctggatgccggtcaagagaagactggagtgcatcgtgaac
agtacactgttcaacgaagtgatcgtgtttgccattctcttcagcgtggtcaccttggcc
gtagagcaccacgggcagcctaaggcgtttacacggatactacaggtcactaacctcgtc
ttcgtcatcatatttattgtggaagtggccatgaagctgctggtactctcaggagcgtac
ttctgggacccaaacaatgtctttgacttttttattgtcatcagcagtgtgtgggagttg
atcgctaaagccgacagcaggttgtccattctgcgtgcgtttcgtctgctgcggttcgtg
aggctggttaaatcccaccctcacctgaagagacagctgcttgtgctgaagaggaccata
gaggaggccgtcgtgctctgtgggctgctgctggtcggcatgttggtttttagtttgctg
ggtatgcagctgttcgggaataaattcaacttccagacaaaggatggagtcaccttcacc
gaccgaaaaaactttgacaccatactctggtccatggtcactgtgttccagattttgacc
ccggatcactggaatctggtgctatacaacggcatggccgccacctccccctgggctgct
ctctactttgtcggactcattttattcggaaaaaatattattcttaatatacttatgggc
atagtggttgagagcttccaggaaaggcgctccagttccgctctctcttcctgcgccgat
ctgactcacttgaccccttcaggggaaggcgacaatgaggaaaatttccagcatgccatc
agtggagactgctctccctctggtcttaggcccagcagatctactgagattaacacagag
gaagagacggacaccaatgagagatctttgagcctgatacaaagagtgctccgctggtgc
aaagagcatgaagactggtcactctacatactgtctccacagaacaggctacgtgtctgt
tgccaacgtgtgatgtctcacacaatgtttgaccacgtggttctgtgcttcattctccta
aattgtatcaccattgctatggagagacctggaatagcccctaaaagtgtggagcgacag
atcattgatacgtcctgttacgtgttctccaccatcttcatgatagagatgttcatcaag
gtcctggctctcggtttggtgtttgggaaggagagctactgccactctccctggaatacc
atggatggtctgctggtggttctctctttagtccacgcccttgtgtctctggccagcagc
ggcatgaaaaaaaagctgggaatcctgaaggttttgcgcctgctgcgcgcacttcgccca
ctgagggttattaagcgagcaccgaaactgaagctggccgtggaagctctgatcgcctca
gttaaacccatcgggaacatcgttctcatctgctgcactttcttcttgttctatggcatc
ctcggagtgcagctgtttaaagggaagttcttctactgtgcgggtaaggacacgagaaac
atcaccagcaggtctgagtgcctgtcagccaactatcagtgggtacgaaagacgtacaac
ttcgacaacctgcctcagggtctgttaacgttgttcgtaatgttctctaaggacaactgg
gtgagcatcatgcatgacggactggatgctgttggagtaaacaaacagcccgtgcagaac
tacaatgagtggatgcttctcttttttatctccttcatggccataagcttcgttctgctc
gacatgttcatcggcgtgatggtggaaaccttttaccagtgtcagcagaagcaaaaaatt
caaaatagattgttacaagaggaggaagcggcgatgagaggaggtgaaatgcaggttcag
gagcccgagcggccgtattacacacactactctcccatgcgtcggtcaatctatgatctg
tgtgtcagcgacttcctggactacttcatgacagccatagttttcatcagtgtcttgatg
atggctttcgagcactataatgaacctgagtatatagagagatttgtagagtactcctat
tatgtcttcaccgccatcctggtaatggaggtcctgctgaagcttgtgggatttggcgtc
ctgaggttcttcacaatagggtggaatctgctggacattgttgtcgccttgatttctgtc
atcagcatcgttttagaaaagacgtttctaaaagtattaccctttaatcccagcatcctg
agagtctgcagagtactccgactggcacaagtgctgaaagccaaaaagatcagacttctg
ctaaaaaccatcatcaagacaatagcacaggttgaaaatattattctgctcttcgcgttc
ttcttctttatctacgctgtgctgggagtggagctctttggcaggctttcatgcagtgat
gataacccatgttacggtttacaccggcacgccaacttcaagcattttgggatggccctg
ttgacgctcttccaagtgtgcaccggagacaactggagcgggattatgaaagacacgttg
aggtcgtgtcgtcctggtgacagcggctgcctgagttacctgcactgggtctctcccatc
tgcttcaccagctttgtggtcatggggcagtttgtgctggccaacctggtggtggcagcg
atcatgcaagcgctggaggacagcaacgagttacagagcaagaccatttaccttccgtct
caggaaggacacgacgcctgcctccaggacggtgaggtggacgaggaagaagaaaactgg
tttgaagccactagttcccttaaatga
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