Larimichthys crocea (large yellow croaker): 104938748
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Entry
104938748 CDS
T04659
Name
(RefSeq) E3 ubiquitin-protein ligase DTX4 isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
104938748
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lco04121
]
104938748
Enzymes [BR:
lco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104938748
Ubiquitin system [BR:
lco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104938748
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-RING_11
zf-RING_UBOX
zf-rbx1
zf-RING_2
zf-UDP
zf-ANAPC11
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
104938748
NCBI-ProteinID:
XP_010753492
LinkDB
All DBs
Position
VI:complement(5984817..6014601)
Genome browser
AA seq
779 aa
AA seq
DB search
MKEVCDGVLDRESGARSSYQCGANSNNMLLASAVVVWEWLNEHGRWRPYSAVVSHQIEAA
IRSSDPRGGSVVLGQVDSRLSPYIIDLQSMHQFRQDTGTIRPVRRSFYDPASAPGQGWQW
EWENDSGTWTAYDMEVAITIESGHNRQQPCLDLTPLGFCYLIDYQNMTQVNRQSQRCRRI
QRRADMAYPIVSGPLPLPKGGGVGGGGGLTGALLGVGVSGTSLGIGSSVYSNGGLPASGL
GQPCSCQQCMLVLSVKTNTGGAGGGGGAGIQTLGRRSLTMQRPKNSAPGASKPLSPSKSA
TLGRGQQQNSNSNSNYYQTLPHGLAISRNIASPRRNAQLFAQSLAALTAGTSSLGISTSY
NRPPPPSLPPPQPPSSNPSMNPPSIPTKQSSSSANESVPTATLISTANSVTTSPSPVPSP
SPVVMKPQRTASTAATMCHAPLPQRSSLAGLSRPALQRIAMAQSRALIASGVPTVPVKNL
NGSSPVHPALAGITGILMSAAALPVCLTRPPKLVLHPPPVSKSDIKPVPGFGHCCRKTTK
KQARKGKTPEEVVKKYLQKVKSPPEEDCTICMEPLGGPSGYKGPGVGPVSRAESVGRLAQ
CGHQYHFQCLVAMYNNGNKDGSLQCPTCKTIYGVKTGNQPAGKMEYHVIPHSLPGHPDCK
TIRIIYNIPPGIQGPEHPNPGKPFTARGFPRHCYLPDSEKGRRVLRLLLVAWDRRLIFSV
GTSSTTGESDTVIWNEVHHKTEFGSNLTGHGFPDPGHLDNVLEELRAQGITEDDGLMEK
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaggtctgtgacggtgtgttggaccgggagagcggagccagaagttcatatcag
tgcggggccaacagtaacaacatgctcctggcctctgccgtggtggtgtgggaatggctg
aacgaacacggccgttggaggccgtacagcgcggtggtgtcccaccagatagaggcggcc
atccggagcagcgacccccgcggagggagcgtggtcctcggccaggtggacagtcgtctg
tcgccgtacatcatcgatctccagtccatgcaccagttcagacaggacacgggaaccatc
cgtccggtgcggaggagtttttatgacccggcttcggcaccgggtcagggctggcagtgg
gagtgggagaatgattcaggtacgtggacggcctacgacatggaggtggccatcaccatc
gaaagcggccacaaccgccagcagccctgcctcgacctgacaccactcggcttctgctac
ctcatagattaccagaacatgacacaggtgaacagacagagccagaggtgtcggaggatc
cagaggcgtgctgacatggcctacccgatagtgtctggtcctctgccactccccaaagga
ggaggtgtaggaggaggtggaggcctaacaggagccctgctgggtgttggggtgtcaggg
accagtttggggattggaagctctgtctactccaatgggggcttaccagcttctggacta
ggccagccttgttcctgccagcaatgcatgctggtcctcagtgtgaagaccaatacagga
ggagcagggggaggaggaggagcagggatacagactctaggtcgacgctcactaaccatg
cagcggcccaagaactcggcgcccggtgcctccaaacctctgagcccgtctaaatcagcc
actctgggacgaggacagcagcagaactccaactccaactccaactactaccagacgctg
ccgcatggcctcgccatttccaggaacatcgcctccccgcggaggaacgcccagctcttt
gctcagtcgctggccgctctcaccgctggcacctcctctctgggcatctccacgtcctac
aacaggccgcctccgccatccctcccaccgcctcagcctccatcgtccaacccgagcatg
aaccccccgtccattccaaccaagcagtcctcctcgtcggccaacgaatcagtgccaacc
gccacgttaatttccacggccaacagtgtgaccacgtccccctctcctgtgccctctcca
tcgccagtggtaatgaagccacagcgcacggcatcaactgcagcgacaatgtgccatgcc
ccgttgccacaaagatcaagcttagccggcctgagcagaccagcgttacagaggattgca
atggcccagtccagagcgctcatagcatcaggcgtgcccaccgtcccggtgaagaacctc
aatggatccagtccggttcaccctgcactggccgggatcacaggcatcctgatgagtgct
gccgctctgccggtgtgtctgaccaggcctcctaaactcgtgctgcaccctccaccagtg
agcaagagtgacatcaaacctgtgccgggctttggccactgctgcaggaagaccaccaag
aaacaggctcgcaaaggtaaaactccagaggaggtggtgaagaagtacctgcagaaagtc
aagagtccaccagaggaggactgtaccatctgtatggaaccgttgggaggtccgtccggt
tataaaggtccaggggtggggcctgtgtctcgggcagagtccgtcgggcgactagcacag
tgtggacaccagtaccacttccagtgtctggtggccatgtataacaatggcaacaaggat
ggcagtcttcagtgtcccacctgtaaaaccatctacggcgtaaagacgggcaaccaaccg
gcagggaagatggagtaccatgtcatccctcactctctaccaggacaccctgactgcaaa
accatacgcatcatctacaacataccaccaggcattcagggaccagagcatccgaaccca
gggaagcccttcactgccagaggctttccccgacactgctacctcccagacagcgagaaa
ggacgcagggttctaagactgctcctggtggcgtgggaccgcaggttgatcttctcagtt
ggtacttcgagcactacaggagagtctgacaccgtcatctggaacgaggtccaccataag
acagagtttggctccaacctgacgggccatggcttccctgaccccggacacctcgacaac
gtcctggaagagctccgagctcagggcatcacagaggacgacggactgatggagaagtga
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