Larimichthys crocea (large yellow croaker): 104939002
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Entry
104939002 CDS
T04659
Symbol
snx6
Name
(RefSeq) sorting nexin-6 isoform X1
KO
K17920
sorting nexin-5/6/32
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104939002 (snx6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lco04131
]
104939002 (snx6)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lco04990
]
104939002 (snx6)
Membrane trafficking [BR:
lco04131
]
Endocytosis
Macropinocytosis
Sorting nexins
104939002 (snx6)
Domain-containing proteins not elsewhere classified [BR:
lco04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
104939002 (snx6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps5
PX
FAN1_HTH
AceES-2
AAA_lid_7
Motif
Other DBs
NCBI-GeneID:
104939002
NCBI-ProteinID:
XP_010753769
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All DBs
Position
XXIV:complement(5709165..5717116)
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AA seq
407 aa
AA seq
DB search
MMQEGLDDGPDFLSEEDRGPRAVNVDLQTDATLQVDISDALSERDKVKFTVHTKSTLPNF
KQNEFSVVRQHEEFIWLHDSFVENEDYAGYIIPPAPPRPDFDASREKLQKLGEGEGSMTK
EEFTKMKQELEAEYLAIFKKTVAMHEVFLCRVAAHPVLRKDLNFHVFLEYNQDLSVRGKN
KKEKLEDFFKNVVKSADGVLVAGVKDVDDFFEHEKTFLLEYHNRVKDASAKSDRMIRSHK
NAADDINRIASSLYTLGTQDSTDLCKFFLKVSELFEKTRKIEARVAADEDLKLADLLKYY
LRESQAAKDLLYRRSRALVDYENANKALDKARAKNRDVLQAETSQQLCCHKFEKISESAK
QELIDFKTRRVAAFRKNLVELAELELKHAKGNLQLLQSCMGVLKGNA
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaggaagggctggacgacggacccgacttcctctccgaggaggaccggggaccg
cgggccgtgaacgtggacttgcagacggacgccacgcttcaggtcgacatctccgacgct
ctgagcgagcgagacaaggtgaagttcaccgtccacaccaagagcacgctccctaacttt
aagcagaacgagttctcggtggtccgacagcacgaagagttcatctggctgcatgactcg
tttgtggagaacgaagactacgcaggatacatcatccctcccgctccgcccaggccagac
ttcgatgcgtccagagagaagctgcagaagctcggagagggagagggctccatgaccaag
gaggagttcaccaagatgaagcaggagcttgaggcagagtaccttgccatcttcaagaag
accgtcgccatgcacgaggtctttctgtgtcgtgtggccgctcatcctgtcctcaggaag
gacctcaactttcacgtcttcctggagtacaaccaggacctgagcgttcgaggaaagaac
aagaaggagaagctggaggacttcttcaagaatgtggtgaagtcagccgacggtgtcctg
gtggccggagtcaaggacgtcgatgatttcttcgagcacgaaaagacatttctgttagaa
taccacaaccgggtcaaagatgcctcggccaaatccgacagaatgattcgctcgcacaaa
aacgctgcagatgacatcaacagaatcgcctcgtctctctacacgttaggaacacaggac
tcaacggacctctgcaagttcttcctgaaagtgtcggagctgtttgagaaaacgaggaag
attgaagctcgagttgcagcagacgaagacctgaagctggccgacctgctaaaatattat
ctgagagagtcccaggctgcaaaggacctgctgtaccggaggagccgggctctggtggac
tatgagaacgctaacaaggctctggataaagctcgagccaaaaacagagacgttctgcag
gctgagaccagccagcagctctgctgccacaagtttgagaagatctcagagtctgccaag
caagagctcatcgacttcaagacaagacgagtggcagctttcagaaagaacctggtagag
ctcgccgagctggagctcaaacacgccaaggggaacctccagctgctgcagagctgtatg
ggtgtcctcaaaggcaatgcctaa
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