Larimichthys crocea (large yellow croaker): 109138823
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Entry
109138823 CDS
T04659
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 3-like
KO
K05044
solute carrier family 6 (neurotransmitter transporter, GABA) member 11
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
109138823
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lco02000
]
109138823
Transporters [BR:
lco02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
109138823
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Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
109138823
NCBI-ProteinID:
XP_027147367
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Position
II:complement(2238881..2243454)
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AA seq
570 aa
AA seq
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MNRQRRKTETQKKAADRGQWASKTEYILVVAGNVVGLGNLWRFPYLCYKNGGGAFLVPYG
LLAVVVGIPLFLLETSIGQYTQEGFVTCWKKLCPLAQGMGYACIIMKLYSLSYVIVQVWA
LLYLVFSFRSQLPWASCENTWNTANCTSLQILDSPTTNQTNQTMPTNTTSAATEFWERRV
LAMSGGIEELGSVRWDLALCLLASWMFCYFSIWKSVKSSGKVAYLTATFPYVMLLILLIR
SLTLPGAWDGIYYYLYLDVNRLAHLEVWIEAGAQIFFSYSLTAGTLNVLGSFNDYNNNCY
KDCFWLCLLNSGTSFVAGFVVFSVLGFMAQKQGVTVDTVAESGPGLAFIAYPQATAMMPF
PQFWTVCFFLMLIFLSVDTHFVGVECFITSACDVFPKVFHKPGRHEIFALIICLIFFLLH
LMFVTEGGVYVFNLVEYYGSTRACRYFMALSECLALAWGFGADRVMNIIEDMTGQRPSVF
FKLCWKYIIPLLSLSSFILYMVDYKRLSINDSYVYPDWAYALGWTMTLSIILVVPLWAAG
QMCLTPGTLRECVNLLISFVPAFVRPLSSC
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgaacagacaaagaagaaaaacagaaactcagaagaaggctgcagacagaggacagtgg
gccagtaaaactgaatatattctggttgttgcaggaaatgtggtcggcctgggaaacctg
tggagatttccttacctctgctacaagaacggtggaggtgcctttctggtgccgtatggt
ctgttagctgtggtggttgggatacctctgttcctactggagacctccattggtcagtac
acccaggaaggatttgtcacttgctggaagaagttgtgtccactggcacaaggaatggga
tatgcatgtatcataatgaaactatatagcttaagttacgttatagtccaagtctgggct
ctcctctacctggtgttctcattcagatctcagctcccctgggccagctgtgagaacacc
tggaatacagctaactgtacgagtcttcagattttggattctccaacaacaaatcagaca
aatcagaccatgccgacaaacaccacctctgctgctaccgagttctgggaacggcgggtg
ctggccatgtctggaggcattgaggagctgggcagtgtgaggtgggatctggctttgtgt
cttctggccagctggatgttctgctacttcagtatctggaaaagtgtcaaatcatcagga
aaggtagcatatttaacagccacgttcccctacgtaatgctcctgatcctactcatcaga
agcttgactctacctggagcttgggatgggatctactattacctgtatctagatgtgaac
cgcctggcgcaccttgaggtctggatagaggcaggagctcaaatatttttctcctacagc
ctgactgcagggactctaaatgtcttgggcagctttaatgattacaacaacaactgttac
aaggactgcttctggctctgtctgctgaacagtgggaccagttttgttgctggatttgtc
gtcttctctgtacttggattcatggctcagaaacagggtgttactgttgacactgtagcc
gagtcaggtccaggtttggccttcattgcttaccctcaggcaacagctatgatgcctttt
ccacagttctggactgtctgctttttcctgatgctcatttttctcagtgttgacacacat
tttgttggagtcgagtgttttatcacctcagcatgtgacgtgtttccgaaggtttttcat
aaacctggaagacacgagatctttgccctcatcatctgcttgatcttcttcctcttacat
ctgatgtttgtcactgaggggggggtctatgtcttcaaccttgttgagtattatggttca
accagagcttgtcgttatttcatggctttatctgagtgtctggctctagcctggggtttt
ggtgctgatcgtgttatgaacatcatcgaagacatgaccggacaaagaccttctgttttc
ttcaaactgtgctggaaatacatcattcctctgctgtcactgagttccttcatcctgtac
atggttgattacaaacgcctcagcattaatgactcgtacgtttaccccgactgggcgtac
gcactgggatggaccatgacactctccattattctcgttgtgccactgtgggcagctgga
cagatgtgtttgacaccaggaacactcagagagtgcgtgaacttactcatctcgtttgtt
ccagcgtttgtccgtcctttgtcgtcctgctga
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