Lysobacter capsici: LC55x_4942
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Entry
LC55x_4942 CDS
T04162
Name
(GenBank) MATE efflux family protein
KO
K26939
MATE family, multidrug efflux pump
Organism
lcp
Lysobacter capsici
Brite
KEGG Orthology (KO) [BR:
lcp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcp02000
]
LC55x_4942
Transporters [BR:
lcp02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
LC55x_4942
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Gene cluster
GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-ProteinID:
ALN88189
LinkDB
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Position
complement(5460820..5462253)
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AA seq
477 aa
AA seq
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MSASSPTDSRPAARSGLAGEIRTTLILAAPLVAGHVSTGLIGFVDNTLAGHHSTTTLASV
TIGTALWWLPMMVPIGTLLSVPPSVSQLEGAGRRGEIGALFRQALWMAVLLSVFLFAFLT
LIPYALGAMGIAPGIIPGARDFLHGIRWGVPALTLFFCMRYLSEGLHWTLPTMLLSAGGL
LILAPLGYVLTFGKFGLPEMGAGGLGVASAAMLWAQAIGFFVVLSRARRFADLRLFERFD
KPHWPTIRGLLATGLPIGVTVLMEGSLFIVTALLIGRLGEVPASAHQIAINLSALCFMVP
MGLAEATTVRVGHAMGRRDYLGVRRAGYAGYAIVIATQLCSGILLLSANELLVSFYTADA
AVATLAASLLLYSAMFQFPDGIQVLSAGALRGLKDTRMPMILAALAYWGVGMPVGAGLGL
GLGWGPKGMWIGLIAGLTVASVLLGLRFLRSSQPERLAARMATEAPHEVDPHETGCT
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcgtcatcccccaccgattcccgccccgccgcccgttccggcctggcgggcgag
atccgcaccaccttgattcttgccgcgccgctggtggccggccacgtgtccaccggcctg
atcggcttcgtcgacaacaccctcgccggtcaccacagcaccaccacgctggcctcggtg
accatcggcaccgcgctgtggtggctgccgatgatggtgccgatcgggaccttgctgtcg
gtgccgccgtcggtgtcgcagctcgaaggcgccggccgccgcggcgaaatcggcgcgctg
ttccgccaggcgctgtggatggcggtgctgctgagcgtgttcctgttcgcgttcctgacc
ctgatcccgtatgcgctgggcgcgatgggcatcgccccgggcatcattcccggcgcgcgc
gatttccttcacggcatccgctggggcgtgccggcgctgaccctgttcttctgcatgcgc
tatctcagcgagggcctgcactggaccttgccgacgatgctgctcagcgccggcggcctg
ctgatcctggcgccgctgggctatgtgctgaccttcggcaagttcggcctgccggaaatg
ggcgccggcggcctgggcgtcgcctcggcggcgatgctgtgggcgcaggcgatcggtttc
ttcgtggtcctcagccgcgccaggcgcttcgccgacctgcgcctgttcgagcgcttcgac
aagccgcattggccgaccatccgcggcctgctcgcgaccggtctgccgatcggcgtgacc
gtgctgatggagggcagtttgttcatcgtgaccgcgctgctgatcggccgcctgggcgaa
gtgccggcgtcggcgcatcagatcgcgatcaacctgtcggcgctgtgcttcatggtgccg
atgggcctggccgaagcgaccacggtgcgggtcggccatgcgatgggccggcgcgactac
ctcggcgtgcgccgggccggttacgccggctacgcgatcgtcatcgccacccagctgtgc
tcgggcatcctgctgttgagcgcgaacgagctgctggtgagtttctacaccgccgacgcc
gcggtcgcgaccctggccgcgtcgttgctgctgtattcggcgatgttccagttccccgac
ggcattcaggtgctgtcggccggcgccctgcgcggcctcaaggacacccgcatgccgatg
atcctggccgcgctggcctattggggcgtgggcatgccggtcggcgccgggctcggcctg
ggcctgggctggggtcccaagggcatgtggatcggcctgatcgccggcctgaccgtggcc
tcggtgttgctgggcctgcgtttcctgcgttccagccagcccgagcggctggccgcgcgg
atggcgaccgaggcgccgcatgaggtggatccgcatgagaccggctgcacctga
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