Lucilia cuprina (Australian sheep blowfly): 111677299
Help
Entry
111677299 CDS
T06013
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
lcq
Lucilia cuprina (Australian sheep blowfly)
Pathway
lcq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lcq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
111677299
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lcq03021
]
111677299
Enzymes [BR:
lcq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
111677299
Transcription machinery [BR:
lcq03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
111677299
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
111677299
NCBI-ProteinID:
XP_023294154
LinkDB
All DBs
Position
6:complement(21045930..21052293)
Genome browser
AA seq
1665 aa
AA seq
DB search
MGTMKTFDVDMFPSDLEFSVFTGEEIKRLSVVKIITGLTFDPLGHPLPGGLYDSQMGTYG
KRMEPCATCLNIQACPGHLGHIELNALVYNPFFIKLVQKMCNVFCFTCQKMQAKEHEIEI
LILQLRLINDGYIVEAQELEMYKSEIVLNNVETKVKLESGDNVHPRIGEMYQLLEKGIIN
KVNVTKTSCALRSAVVNAALQRPSSKKCIHCKNPLRNIRYLHRKLVYYMSISEIKSKFEN
VDEPSGQHKVIFADECRKFLRQVYNNYPELMQLLFPILNINLKSNDQDASPVDIFFMDTI
PVTPPKARPSNILHNQIVEHTQTALYRNIIENNSVLRVVLKHIKGQVDDMSKEAKEAFIS
TRGETPYEKLYNAWQNLQSSINILLDVNMSRDSPSSTGLKQVLEKKEGLIRKHMMGKRVN
YAARTVITPDPNINVEEVGIPDIFAKKLSYPVPVTPWNVAELRKMVMNGPNVHPGANYIQ
DERGYTTIIPADNAAKRESMAKLLFNYPEKGIKIVHRHVLNGDVLLLNRQPSLHRPSIMA
HKARILQGEKTFRLHYSNCKAYNADFDGDEMNAHLPQSEVARSEAYNLVNVANNYLVPKD
GTPLGGLIQDHVISGVKLSLRGRFFNRDDYQQLVFQGLSHIKKNIKLLPPTIIKPIQLWS
GKQILSTIIINLIPEGYTPISLNSVAKIGDKHWMVTNSRKAIAGGTELKNTQMSESEVVI
RNGELLTGVLDKQQYGATTYGLIHCMYELYGGETSTCLLTAFTKVFTFFLQREGFTLGVK
DILVTSKADAKRRKIIQESREIGNAALASALDLEDVPSLDVLSEKMEEAYIKDPQFRVVL
DRKYKAMLDNYTNDINKTCLPDGLITKFPSNNLQLMVLSGAKGSMVNTMQISCMLGQIEL
EGKRPPLMISGKSLPSFTSFETSPKSGGYIDGRFLTGIQPQDFFFHCMAGREGLIDTAVK
TSRSGYLQRCLIKHLEGLTINYDLTVRDSDNTVVQYLYGEDGLDILKSKFFDSKFGTDFL
TQNSSVILSPQELSKIKNEEELSKVQRHNKKLRTWLKKRSSAAKAHTKHLSPFTEFSAEL
RNEIEVENPNELNEMSGRRRIDEAIIKLWLKADADSKKLYRKKYSRQPDPTNSVYSQDTT
FGSVSEKMEQIVADYIEKHPNRKDVVTDVMYVKNVKALAAPGEPVGLLAAQSIGEPSTQM
TLNTFHFAGRGEMNVTLGIPRLREILMMASANIKTPSMDIPIKANQEKLAEKLRISLNRV
TLADVLQYVNVKTQLVQQPTRSQKYELTFQFLPREVYSDDFCVKPKQILKFMSNMFFKAL
FRAIIKSNKSKSLIIEMDDNQKEDSNNDDKIDGDDGENTSDSNKKSKTNEATNDNDKDSS
DEEDGNDDGDDATGIKLKSRKVDETEYDDPDDADELKDAQDDEDANDDGFFDTEAVEDNS
EEVESEKSDKQMEKILENSMVENYVYDKKHYLWAKLTFNIDMKYKQPNILSIIKELAQKT
VIHQVDKIKRAIIYKGNNNEQTLKTDGINIVEMFKHNTVLDLNRLYSNDIHAIARTYGIE
AAAQVIVQEVTNVFKVYGITVDRRHLSLIADYMTFNGTFQPLSRKGMEHSSSPLQQMSFE
SCLQFLKNAAGAGCVDELNSPSSRLMVGLPVKNGTGAFDLLTKIC
NT seq
4998 nt
NT seq
+upstream
nt +downstream
nt
atgggtaccatgaaaacatttgatgttgacatgtttccaagcgatttggaattctcagtt
tttactggtgaagaaatcaaacgtctcagcgtggtcaagattattactggtctaacattc
gatcctttgggacatcctctgccaggaggtttatacgatagtcaaatgggaacttatgga
aaacgcatggagccatgtgcaacatgcctaaatatacaggcatgtcctggccatttgggc
cacatcgaattaaacgcattggtatataatccattttttattaagcttgtgcaaaaaatg
tgcaacgtattctgttttacttgccaaaaaatgcaggcaaaagaacatgagatcgaaata
ctaatactacaattacgactcatcaatgatggctatattgtggaagcacaagaattggag
atgtacaaatctgagatcgtgctaaataacgtagaaacgaaggtaaaattggaaagtgga
gacaatgttcatccacgtattggggaaatgtaccagcttctggagaaggggatcatcaac
aaggtaaatgtgacaaaaacttcctgtgctctccgctcggctgtggtaaatgcagcactt
caacgtccatcttcaaagaaatgtatacattgtaaaaatccattgcgaaatatccgttat
ctacatcgtaaactcgtctactatatgagcatttcggaaattaaaagcaaatttgaaaat
gtagatgaacctagtggtcaacataaagttatttttgctgatgagtgtcggaaatttttg
cgccaggtttataataactatccggaattgatgcaactactatttcccattctcaatatt
aatttaaaatcgaacgatcaagatgcttccccagtcgacatatttttcatggacacaata
ccagtaacaccaccaaaagctcgaccttcaaatatattacacaaccaaattgttgagcat
actcaaacagctctttatcgcaatataattgaaaataattcagtacttcgtgtagttttg
aagcacattaaaggtcaagttgatgatatgtctaaagaagcaaaggaagcattcattagt
actagaggagaaacaccatatgaaaaactttataatgcttggcaaaatttacaatcatct
attaatattttattggatgttaacatgtcgagagattctccatcttcaactggtttgaaa
caagttttggaaaagaaagaaggtcttatacgcaagcacatgatgggtaaacgtgttaac
tatgcagcgcgtactgtcataacacctgatcccaatatcaatgtagaagaagttggtatt
ccagatatatttgcgaaaaaattatcttatcccgttccggtgactccatggaatgttgct
gagttacgtaaaatggtaatgaatggaccaaatgtacatcctggtgccaattacatacaa
gatgaaaggggctacacgactataattcctgctgataacgctgcaaaaagagagagcatg
gcaaaattattgtttaattacccagaaaagggcattaaaattgtacatcgtcatgtgctt
aacggcgatgtattacttttgaatcgtcagccatctctacatagaccttcaattatggcc
cacaaagctcgtatcttacaaggggaaaagactttccgtctacattactctaactgtaaa
gcttataatgctgattttgatggtgatgaaatgaacgcccatttgccacaaagtgaagtg
gcacgttctgaagcttacaacttagttaatgttgctaacaattacttggttccaaaggat
ggcacacctcttgggggtcttattcaggatcacgttatatcaggtgtaaaattgtctctg
agaggacgtttctttaatcgtgatgattaccaacagcttgtcttccaaggtttatcgcat
ataaagaagaacataaagcttttgccaccgactattatcaaacccatacagctgtggtct
ggaaaacagattttgtcgactataattataaatctgattcccgaagggtacactccgata
tctttgaactctgtggcaaaaattggtgataaacattggatggtcaccaatagtagaaaa
gctattgcaggaggcacagaacttaaaaatactcaaatgtcagaaagtgaagttgttata
cgaaatggtgaacttttaactggtgttttagataaacaacaatacggtgccactacatat
ggtttaattcattgcatgtacgagctgtatggaggggaaacatccacctgcttattgaca
gcttttaccaaagtatttactttcttcttgcaacgtgagggctttacattgggtgtcaaa
gatattcttgtcaccagtaaggcagatgccaaaagacgaaaaattatacaagaaagcaga
gaaattggaaatgctgcattagcttcggccttggatttggaagatgttccttctttggat
gtgctatctgaaaagatggaggaagcttacatcaaagatcctcaatttcgtgtcgtctta
gatcgcaaatacaaagctatgttggacaactacactaatgacatcaataaaacttgttta
cccgatggtttgataacaaagtttcctagtaataatctacaattaatggttttatctggc
gctaaaggctccatggtaaacactatgcagatttcgtgtatgttgggccaaattgaattg
gaaggtaagcggccgcctctaatgatatccggaaagtcgttgcccagtttcacttcgttt
gaaacatcaccaaaatctggcggctacatcgatggccgtttcttaacgggcatacaaccc
caggatttctttttccattgtatggctggtcgtgagggtcttattgatactgctgtaaaa
acttcccgttctggttatttgcaacgttgtcttattaaacatttagagggtttgacaatt
aattatgacttaacggttcgtgatagtgacaacactgtggtacaatatctttatggcgag
gatgggcttgatattttgaaatcgaagttttttgatagcaaatttggtacagacttttta
acgcaaaattcttcagtcattttgagccctcaagaattgtccaagattaaaaacgaagaa
gaactctctaaggtgcagcgtcacaataaaaagttgcgcacttggttgaagaaacgcagc
agcgccgcaaaagctcacacaaagcatctctcgccatttacagaattctccgcagaactt
cgcaacgaaattgaggtggaaaaccctaacgaattaaatgaaatgtctggtagacgtcgt
atagatgaagccataatcaaattgtggctcaaggcagatgctgatagtaaaaagctgtat
cgaaaaaaatattcccgccagcctgatcccacaaattcagtttatagccaagatacaact
ttcggctctgtgtccgaaaaaatggaacaaattgtagccgattacattgaaaaacatcca
aatcgaaaggatgtcgtcaccgatgttatgtatgttaaaaatgttaaagcattagcagct
ccaggtgaaccggttggtttgctggcggcgcaatccattggtgaaccctctactcagatg
acacttaacactttccattttgctggccgtggtgaaatgaacgttactttgggtattcca
cgtctgcgtgaaattcttatgatggcttcggccaatatcaagacgccatccatggatata
ccaattaaagccaatcaagagaagttagcggaaaaattaagaatatctttgaatcgggtg
actcttgccgatgttttacaatatgtaaatgttaagacacaattggttcaacagcctacc
agatcgcaaaaatatgaattaacttttcaatttctgccgcgtgaagtatatagcgatgat
ttttgtgtgaaacccaaacaaatacttaaatttatgagcaatatgttctttaaagctctt
ttccgtgccatcatcaagtcaaacaagtcaaaatctctaatcattgaaatggacgataac
caaaaagaagattcaaacaacgatgataaaatagatggcgatgatggtgaaaacacaagt
gatagcaacaaaaaatcgaaaacaaatgaagcgactaacgacaatgataaagattcgtca
gatgaggaagatggtaacgatgatggcgatgatgctactggcataaaacttaaatctcgt
aaagtggacgaaactgagtacgatgaccccgatgatgctgatgaactaaaggatgcccaa
gatgatgaagatgcaaacgatgatggattctttgataccgaagctgttgaggacaatagc
gaagaagtagaaagtgaaaaaagtgataaacaaatggagaaaatccttgaaaattcgatg
gtagaaaattatgtttatgataagaaacattatttgtgggcaaaattgacatttaatatt
gatatgaaatataaacaacccaacattttatcgattataaaagaattggctcaaaagact
gtaattcatcaagttgataaaattaagcgcgctattatctataagggcaacaataatgaa
cagacacttaagaccgatggtattaacatcgttgaaatgtttaaacacaatacagttctt
gacttaaatcgtttatactcaaacgatatacacgccattgctcgcacttatggtattgaa
gctgccgcccaagtgattgttcaggaagtaacgaacgttttcaaagtgtatggcattacg
gtggatcgtcgtcacttatcgcttatagctgattacatgacctttaatgggacattccag
ccattgtcccgtaagggcatggaacactcttcctcaccactccagcagatgtcgtttgag
tcgtgtttacaatttttgaaaaatgctgcaggagctggttgtgtggatgaattgaattca
ccatccagtcgtttgatggttggactgccagttaagaatggcacaggtgcctttgatctg
ttgacaaaaatatgctaa
DBGET
integrated database retrieval system
