Lucilia cuprina (Australian sheep blowfly): 111685242
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Entry
111685242 CDS
T06013
Name
(RefSeq) E3 ubiquitin-protein ligase parkin
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
lcq
Lucilia cuprina (Australian sheep blowfly)
Pathway
lcq04120
Ubiquitin mediated proteolysis
lcq04137
Mitophagy - animal
lcq04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lcq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111685242
04120 Ubiquitin mediated proteolysis
111685242
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
111685242
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcq04131
]
111685242
04121 Ubiquitin system [BR:
lcq04121
]
111685242
03029 Mitochondrial biogenesis [BR:
lcq03029
]
111685242
Enzymes [BR:
lcq01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
111685242
Membrane trafficking [BR:
lcq04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
111685242
Aggrephagy
Other aggrephagy associated proteins
111685242
Xenophagy
Other xenophagy associated proteins
111685242
Ubiquitin system [BR:
lcq04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
111685242
Mitochondrial biogenesis [BR:
lcq03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
111685242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_14
zf-RING_12
ubiquitin
IBR
Rad60-SLD
Dsc3_N
Rad60-SLD_2
Ubiquitin_5
DUF4193
Motif
Other DBs
NCBI-GeneID:
111685242
NCBI-ProteinID:
XP_023303265
EnsemblRapid:
LOC111685242
LinkDB
All DBs
Position
2:54399734..54401765
Genome browser
AA seq
480 aa
AA seq
DB search
MSFLINLIKAFIDKMLALLSFGSKTITNTLSIYVKTNTGRTLSVNLEPKWDIKNVKEIVA
PQLGLQPEEVKIIFAGKELSDATTIEECDLGQQSILHAIQARPVQQRKRLYSTVAEEEST
EEQPSKPLCETLVDLQLLSEERSNIPEENRERSKAHFYVHCSQCNKLCKGKLRVRCSLCK
GGAFTVHRDPECWDDVLKSRRIRGHCESLEIACVDNDIGDPPFAEFYFKCAEHISGGEKD
FAAPLNLIKINIKDIPCLACTDVSDTVLVFPCESKHVTCIECFLHYCRSRLMERQFMPHP
DIGYTLACPAGCENSFIEEIHHFKLLTREEYERYQRFATEEYVLQAGGVLCPQPGCGMGL
LVEPDCKKVTCQNGCGYVFCRNCLQGYHLGDCLPENGTGNITGSCEYAVDPNRAAEARWD
EASNVTIKVSTKPCPKCRTPTERDGGCMHMVCTRAGCGFEWCWVCQTEWTRDCMGAHWFG
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgagttttctaatcaatttaataaaagcttttatcgataaaatgctagcgttattatcg
tttggtagtaaaacaattacgaatactttgagtatttatgtaaaaacaaatacgggacgt
acgttgtcagtgaatttggaacccaaatgggatataaaaaacgttaaagaaatagtggcg
ccccaattgggtctacagccagaagaggttaagattatctttgctggtaaggagcttagc
gatgcaacaacaattgaggaatgtgatttagggcaacagagtatattgcatgccatacag
gcaagacctgtgcagcagaggaaacgtttatactcaaccgtagccgaggaggagtctacg
gaagaacagccatcaaaaccattatgtgaaactttggttgacttgcaattattaagtgag
gaaagatctaatataccagaagaaaatcgtgaacgttctaaggctcatttttatgttcat
tgttcccagtgcaataaattatgtaagggcaagttacgtgttcgttgttctttgtgtaag
ggtggtgcatttactgtacatcgtgatcccgaatgttgggatgatgtcttaaaatccaga
cgcattagaggtcactgtgaatctttagaaattgcctgtgtagataatgatattggtgat
cctccctttgctgaattctattttaaatgtgctgaacatatttcgggtggtgaaaaggat
tttgctgctcctcttaatcttatcaaaattaatataaaggatattccctgtttggcctgt
acggatgtaagcgatactgttttagtttttccctgcgaatcgaaacacgtcacctgtatt
gaatgctttttacactattgccgttcacgtctcatggaacgtcaatttatgcctcatccc
gatattggttacactttggcttgcccggccggttgtgaaaattcgtttatagaggaaatt
caccattttaagttattaacacgtgaggagtatgaacgttatcaacgttttgccactgag
gaatatgttttacaagctggtggagttttatgtccacaacctggctgtggtatgggtctc
ttggtagagccggattgtaaaaaagttacttgtcaaaatggttgtggatatgttttttgt
cgtaattgtttacaaggttatcatttgggcgattgtcttccagagaatggtacaggaaat
ataacgggttcttgtgaatatgctgtagatccgaatcgtgctgctgaagctcgttgggat
gaagcgagtaatgtaactatcaaagtgtctaccaaaccctgtcctaaatgtcgcacaccc
actgagcgggatggtggttgcatgcatatggtctgtacacgtgccggctgcggttttgaa
tggtgttgggtgtgtcaaaccgaatggaccagggattgtatgggtgctcattggttcggt
taa
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