Lacticaseibacillus paracasei BD-II: LCBD_3146
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Entry
LCBD_3146 CDS
T01955
Symbol
gidA
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
lcs
Lacticaseibacillus paracasei BD-II
Brite
KEGG Orthology (KO) [BR:
lcs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lcs03016
]
LCBD_3146 (gidA)
03036 Chromosome and associated proteins [BR:
lcs03036
]
LCBD_3146 (gidA)
Transfer RNA biogenesis [BR:
lcs03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
LCBD_3146 (gidA)
Prokaryotic type
LCBD_3146 (gidA)
Chromosome and associated proteins [BR:
lcs03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
LCBD_3146 (gidA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
GIDA_C_1st
SAM_GIDA_C
FAD_oxidored
FAD_binding_2
Pyr_redox_2
AlaDh_PNT_C
Pyr_redox
DAO
HI0933_like
ThiF
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
AEA58635
UniProt:
A0A291IZ21
LinkDB
All DBs
Position
complement(3062837..3064738)
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AA seq
633 aa
AA seq
DB search
MPDVKKFEAGTYDVIVVGAGHAGCEAALAAARMGQKTLLLTISLEMLAFMPCNPSLGGPA
KGIVVREIDALGGEMGKNIDRTYIQMRMLNTGKGPAVRALRAQADKAAYHRSMKHVIENT
PNLDLRQGLATEVLVENGQAVGIVAATGAMYRAKSVVLTAGTSSRGKIIIGELMYSSGPN
NSLPSIKLSENLEQLGFKLRRFKTGTPPRVNGNTIDFDKTEEQPGDKTPNHFSFTTPDSV
YLKDQLSCWMTYTNATTHQIIRDNLDRAPMFSGVIKGVGPRYCPSIEDKIVRFADKPRHQ
LFLEPEGRDTSEYYVGDFSTSMPEEIQLKMLHSVAGLEHAELMRAGYAIEYDVIEPWQLK
ATLETKVVDNLFTAGQMNGTSGYEEAAGQGIMAGINAALRAQGKGPFTLKRSDAYIGVMI
DDLVTKGTNEPYRLLTSRAEYRLLLRHDNADLRLTPMGHELGLISDERYAEFLAKRQAIE
TELNRLNTTRLKPKDVNPWLEAHHYAPLKDGVLASDFLKRPEIDYQTMAQFLPDNPTLDH
RVIEQVEIQIKYAGYIAKEEASVAKLKRLEGKKIPLRINYAAINGLATEARQKLVKIQPE
TIAQASRISGVNPADVAILSVYIEQGRISKVAQ
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgcctgatgtcaaaaaatttgaagccggtacctatgatgtcatcgttgttggtgctggt
cacgctggttgtgaggccgctttggcagccgcgcggatgggccaaaagacgttactattg
acgatcagcttggaaatgctggcgtttatgccgtgtaatccaagtctgggcggcccagcc
aagggaatcgtggtgcgtgaaattgatgcactcggtggtgaaatgggcaagaatattgat
cgaacatatattcagatgcggatgcttaacaccggcaagggcccagccgttcgtgcatta
cgggcacaggctgataaagcagcctatcaccgcagcatgaaacacgtgattgaaaacacg
ccaaatctggatctgcgtcaaggcctcgctactgaggtgctcgtcgaaaatggccaagct
gtcggtatcgtggcggcaactggcgcaatgtatcgggccaagagtgttgttttgaccgca
ggcaccagttctcgtggcaagattatcatcggtgagttgatgtacagttctggtcctaat
aacagcctgccaagtatcaagctgtcagaaaatcttgaacagctcggcttcaaattgcgg
cgatttaaaaccgggaccccgccgcgagtcaatggcaacaccatcgactttgataaaacc
gaggaacagcctggcgataagactccgaatcattttagcttcacgacgccagattcagtt
tatttgaaggatcagcttagttgctggatgacttacactaatgcaacgacccatcaaatt
attcgcgataatttggatcgggcgccaatgttttccggtgtgatcaaaggggttggcccg
cgctattgcccatcaattgaggataagatcgttcgttttgctgataagccgcggcatcaa
ctgttcttagagccagaaggtcgcgatacctccgaatactatgtcggtgatttttcgact
tctatgccagaagaaattcaactgaaaatgctgcatagtgtggctgggttggaacatgcc
gaactcatgcgtgccgggtatgcaattgagtacgatgtgatcgagccatggcaactgaag
gccacgttagaaaccaaagtcgttgataatcttttcactgccggccagatgaatggcacc
agcggctatgaagaagcagctggccaaggcattatggctggcatcaatgcggcgttgcgt
gcccaaggcaaagggccgttcacgctcaagcgttccgatgcctatattggtgtgatgatt
gatgatttggtgactaagggcacgaatgaaccttatcgcctgttgaccagccgtgctgaa
tatcgacttttgttgcgccatgacaatgccgatctgcggctgacaccaatgggccatgag
cttggtttaattagcgatgagcgctatgctgaatttttggcaaagcgtcaggccattgaa
accgaacttaaccggctgaatacgacccggttgaagcctaaagacgtgaatccatggcta
gaggcccatcattatgcgccacttaaggatggcgtcttggccagtgacttcctgaagcgg
ccggaaatcgactatcagacgatggcgcaattcttgccagataatccgactttggatcat
cgtgtcattgagcaggttgagattcaaattaagtatgctggctatattgcaaaggaagaa
gccagtgtcgccaaactgaaacgcctagaaggcaaaaagattccgctacgtattaactac
gcggccatcaatggtttggcaactgaagcacgtcagaagttggttaaaatccagccagaa
accattgcgcaggcgagtcgtatcagcggcgtcaatcctgccgatgtggcgattttgtca
gtgtacattgagcagggacgcattagtaaagtggcccaataa
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