Lacticaseibacillus casei 12A: LCA12A_2293
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Entry
LCA12A_2293 CDS
T03665
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
lcx
Lacticaseibacillus casei 12A
Pathway
lcx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lcx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LCA12A_2293
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcx03400
]
LCA12A_2293
Enzymes [BR:
lcx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
LCA12A_2293
DNA repair and recombination proteins [BR:
lcx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
LCA12A_2293
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
EKQ00336
LinkDB
All DBs
Position
complement(944001..944759)
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AA seq
252 aa
AA seq
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MKLISWNVNGLRAVLKKEFMTIFNELDADWFCLQETKMQAGQVELDLPGYHQYFNYAERK
GYSGTAIFTKHEPLNVTYGMGVPEHDTEGRIITLEYPNFYLMTVYTPNSGGELKRLDYRQ
QWDKDFLAYTNQLAAKKPLVYCGDLNVAHQEIDLKNDKTNHHNAGFTDEERADFTKQLDS
GFIDTFRNLYPDTVTYSWWSYRFHARANNAGWRIDYFVSSRDFKPYIQDAKILTDIMGSD
HCPVELVTKDLI
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaatttcttggaacgtgaatggcttacgagctgttttaaaaaaagagtttatg
actatttttaatgaattagacgccgactggttctgtttgcaggaaaccaaaatgcaggca
ggccaagttgaactcgatctgcctggctatcatcaatactttaactacgctgaacgcaaa
ggctattctggtacggccattttcaccaaacatgaaccgctcaatgtcacgtatgggatg
ggcgttcctgaacatgatactgaaggccggatcattaccttagagtatccaaacttctat
ttgatgacggtttatacgccgaactctggtggtgaactgaagcggctggattaccgccag
caatgggacaaagattttcttgcctacacgaaccaactcgcggccaaaaagccgctcgtt
tactgcggcgatttaaatgtcgcgcaccaagaaatcgaccttaaaaatgacaagaccaat
caccacaacgccggctttaccgatgaagaacgggctgactttacaaaacagttagatagc
ggctttatcgatacattccggaacttgtatccagataccgtcacttactcatggtggagt
tatcgattccatgcccgcgctaataacgctggttggcgtattgactactttgtcagcagc
cgtgacttcaaaccatatattcaggatgcaaaaattctgaccgacattatgggcagtgac
cactgtccagttgaacttgtcacaaaagacttgatttag
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