Loigolactobacillus coryniformis subsp. torquens: LC20004_04770
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Entry
LC20004_04770 CDS
T05341
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
lcy
Loigolactobacillus coryniformis subsp. torquens
Pathway
lcy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lcy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LC20004_04770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcy03400
]
LC20004_04770
Enzymes [BR:
lcy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LC20004_04770
DNA repair and recombination proteins [BR:
lcy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LC20004_04770
Prokaryotic type
LC20004_04770
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ATO45004
UniProt:
A0A2D1KSC0
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All DBs
Position
994556..995254
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AA seq
232 aa
AA seq
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MKTIIHNDWQTVLEPEFEQAYYAQLHQFLKQEYATQTVYPDMYHIFTAFEWTPFSQVKVV
ILGQDPYHNPNQGMGVSFAVRPGVRLPPSLQNIYKELQDDLGIAPVEHGYLKSWADQGVL
LLNSVLTVRRGQAFSHKGKGWEQLTDKAIEKLSQRGKVVFILWGNAAKAKRALIDETKNV
VLTAAHPSPFSARYGFFGSHPFSQTNAALEKFGETPIDWRLPAHVDEDQPTA
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaattattcataatgattggcaaactgttttggagccagaatttgaacaggcg
tactacgcacagttacatcaatttttaaaacaagaatacgctacacaaacggtttatcct
gacatgtatcacatttttacagcttttgaatggacgccgtttagtcaggtcaaggtggtt
atattaggccaagatccttatcataatccaaatcaggggatgggggtcagttttgcggtg
cgtcctggtgtccgcttaccaccatcgttgcagaatatttataaggaattgcaggatgat
ctcggtattgcgccggtggaacacggctatttgaaatcgtgggccgatcaaggcgtgctg
ctgttaaattctgtgttgacggttcggcgtggtcaggctttttcgcacaaaggtaaaggt
tgggaacagttgaccgacaaagcaattgaaaaattatcgcagcgcgggaaagtcgtcttt
attctctggggtaatgccgctaaagctaagcgtgctttgatcgatgagacgaaaaacgtg
gtactgacggcggcacatccgagtccgttttctgctcggtatggtttttttggttcgcac
ccattttcacaaacaaatgcggctttagaaaaatttggcgaaacgccgatcgactggcgt
ttaccggcacatgtggacgaagatcagccaacagcttaa
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