Lacticaseibacillus paracasei Zhang: LCAZH_0866
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Entry
LCAZH_0866 CDS
T01280
Name
(GenBank) membrane-associated HD superfamily hydrolase
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
lcz
Lacticaseibacillus paracasei Zhang
Pathway
lcz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lcz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LCAZH_0866
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcz03019
]
LCAZH_0866
Messenger RNA biogenesis [BR:
lcz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LCAZH_0866
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_PNO1_2nd
KH_KhpA-B
KH_NusA_2nd
KH_2
Motif
Other DBs
NCBI-ProteinID:
ADK18113
LinkDB
All DBs
Position
849223..850797
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AA seq
524 aa
AA seq
DB search
MMSSVTLVSITLAAVIALAVGLLIGFALQKKLHQNNLDRATQTAEGIIEAAKKEAATLKK
EKLLEAKDENHRYRTQLEDELKDRRTEVQKSEHRLNQREDTLDRRDDTLDRKEQSLADRE
ANLNKRQQQLDEREQDISSEISKQHTELERIAELTHEQARQQILDQTQSELTHERAVMIK
ESEDEAKEAADKKAKVLIADAIQRSASDIVAETTVTVVNLPNDDMKGRIIGREGRNIRTL
ETLTGIDLIIDDTPQAVVLSGFDPIRREIARIALEKLIQDGRIHPARIEEMVDKARKEMD
DRIREIGEQAIFDVGIHNMHPDLIKILGRLHFRTSYGQNVLDHSIQVAKLTGVMAAELGE
DVTLAKRAGLLHDIGKALDHEVDGSHVEIGVELATKYKEPKTVINAIASHHGDVEPTSVI
SVLVAAADAISAARPGARSESLENYLHRLEKLEAIANSHAGVDHSFAIQAGREVRVIVQP
EKLSDDQSVILARDIRNEIEKELEYPGHIKVTVIRETRTVEYAK
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgatgagttcagtaacactggtctcaataaccctcgcagcagtcatcgctttagcggtc
ggtttattgatcggatttgcacttcaaaagaagctccaccagaacaatttggatcgagcg
acgcagacagcagaaggcattattgaggccgctaaaaaagaagcagcgactttaaaaaaa
gaaaaactgctggaagcaaaagacgagaatcatcgctatcgaacccaacttgaagatgaa
ttgaaagatcggcggacagaagtccagaagtcggaacatcgactgaatcagcgagaggat
actttggatcggcgggacgatacgctagatcgcaaggaacaaagtcttgctgaccgggaa
gcaaatttgaacaagcggcagcaacagctagatgaacgtgaacaagatatctcttcagaa
atcagtaaacagcacacagaacttgaacggatcgccgagttgactcatgaacaggctcgg
cagcagattcttgaccagacacaatcagaactgacgcatgaacgcgccgtgatgatcaaa
gaaagcgaagatgaagctaaggaagccgcggataagaaagctaaagtactgatcgccgat
gcgattcagcgcagcgcttctgacatcgttgccgaaacgacagtgaccgtggtgaacttg
ccaaatgacgacatgaaaggccgaatcatcggccgtgaaggtcgaaatattcggacactt
gagactttgacaggtatcgatttgattattgatgataccccacaagccgttgttttgagc
ggctttgacccaattcgccgggaaatcgcgcgaattgctttggaaaaactcattcaagat
ggtcggatccatccagcacgaattgaggaaatggttgataaggcgcgcaaagaaatggac
gaccggattcgtgaaattggtgaacaagccattttcgacgtcggtatccataatatgcat
cccgatctgattaagattttgggccgattgcacttccgtacgagttacggtcagaacgtt
ctggatcattcgattcaggtcgccaaactgactggtgtgatggctgctgaattaggagaa
gatgtcaccttagcgaaacgcgcggggctattacatgatataggcaaggcgcttgaccat
gaagttgacggatctcacgttgaaatcggggttgagctggcaacgaagtataaggaacca
aagacggtcatcaacgccattgcatcccatcatggtgacgttgaaccaaccagtgtcatt
tcggtactggttgccgcagcagatgcgatttcagctgcccgcccaggcgcgcggtcggaa
tcgcttgaaaactatcttcatcgtttggagaaactagaagcaatcgccaacagtcatgct
ggcgtggatcatagtttcgctattcaagcaggtcgagaagtccgggtcatcgtccaaccg
gaaaagctctctgatgatcagagcgtcatcttggctcgtgatattcgcaatgaaattgaa
aaagaactggagtatccaggccatatcaaagtcaccgtgattcgggagacaaggactgtg
gaatacgccaagtaa
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