Lacticaseibacillus paracasei Zhang: LCAZH_1481
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Entry
LCAZH_1481 CDS
T01280
Name
(GenBank) ATP-dependent exoDNAse
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
lcz
Lacticaseibacillus paracasei Zhang
Brite
KEGG Orthology (KO) [BR:
lcz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcz03400
]
LCAZH_1481
Enzymes [BR:
lcz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LCAZH_1481
DNA repair and recombination proteins [BR:
lcz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LCAZH_1481
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
DEAD
PDDEXK_1
AAA_12
ResIII
DUF2059
AAA_16
Herpes_ori_bp
NACHT
Motif
Other DBs
NCBI-ProteinID:
ADK18713
UniProt:
K6S1Q6
LinkDB
All DBs
Position
complement(1448821..1452525)
Genome browser
AA seq
1234 aa
AA seq
DB search
MTQFTTSQQAAITHDGHDVLVSASAGSGKTTVLVERIIQKILKQHADITRMLIVTFTRAA
TAEMRTKIQTALKKALTERRHELSGEDRRHLANQIAMVNAAKISTLDAFSLQIVQTYYYV
IDLDPGFRLLTDETERYMLQERVWDDLREQLYASDEAPAFEQLTANFSGDRDDSGLQDLM
FELIRQAGATTDPKAYLEGLATPYAPEKWEATFSQQIWPRVKGQLLQIATSLTQASALAN
QLPNPIWYQQIQADLAPLQTLLETNAPTYDTVRSVLISHEFAAWSRISKGLDDADKDTKN
AAKDLRDAAKKTWQNKLAPTFALAAEQIGDLLREAQPLVATLANVALKFEDALTAEKAAR
HVQDYSDIAHNALRILQQKDPQTGAPIADNYRASFDEVMVDEYQDISPLQEALLAAVSTT
TPGDRFMVGDVKQSIYGFRLADPQLFIHKYQTFQDAPTDPAAPERIILAENFRSTKNVLA
FTNLIFSQIMDPEVGDLSYDNAAALKYGALDYGDAHPAVKVLLYSKATSDEDSSDASELP
GDADDNEPVDIATGQTQLVLAEIQRLINDPDAQLWDRQAQEYRRIHYRDITLLTRQTSQN
SLIQTQFAAAGVPLFVADTKNFFKTTELMVMLALLKVIDNQKQDIPLVAVLRSPIVGLSA
DQLALIRLAAKQVPYYDAVTAFLQAEPKTPLAQRTHDMLTHFFNQLSHFRDLARENDLVT
LLWAIYQDTGFLDYVGGTPGGSQRQANLQALIDRARTYEAGGFKGLFAFIHFITLMQKQD
QDLAMPAQVDPDNDAVKLMTIHKSKGLEFPVVFLMQANKHFNMRDQTGTAILTKQGIGIK
WLDPETRVEYELPQYQAAKAARQNQTLAEEMRLLYVALTRAQQRLYVVGATMSGNQLTSA
DKTVEKWAAAAEGEARVLAPQVRSGATSYLDWIGPALIRHPQARGLAETTIKPALVGDET
EFTIEIDVNPQVTPTATPEKVSDDSGTMVDLSAWFKKAYPFQAATTTTGFQSVSEIKRAF
DDPDTIDLVNADRFLGPKPPMRDLTAPAFLTETPSGISPAAIGTATHLLLQLVDLAKPIT
MASLRALRDQLTTTQVIAVDVAKHIDLTALIRFFETDLGRLLLAKPQQVHREVPFSMLLP
ADQVFEALADDPGEDVLIHGIIDGYVSDEQGVTLFDYKTDHNPNTAVLVDRYRGQLNLYA
QALQDLQPKPVLHRYLVFLRTGTVVDLVASGAGK
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atgacccaatttacaacctctcaacaagcagcgattacccacgacgggcatgacgtgctg
gtttccgcctctgctggtagcgggaaaaccaccgtgttggttgagcgaattattcaaaag
attctcaaacagcatgccgacattacccggatgttgatcgtgacatttactcgtgcggca
acagccgaaatgcgaaccaagattcagacggctttgaagaaggcactcaccgagcgacga
catgagcttagtggtgaggatcggcgtcatcttgccaatcaaattgctatggttaatgcg
gctaaaatcagtacgctggatgcctttagtttgcaaattgtccaaacttactactatgtc
attgatcttgatcccggttttcggttgcttacggatgaaactgaacgctacatgctgcaa
gagcgcgtttgggacgatttgcgtgaacaattatatgccagtgacgaagcacctgcgttt
gaacaactcacggctaattttagcggggatcgagatgatagcggtttgcaagacttgatg
tttgagttgatccgccaagccggtgcgacaactgatcccaaggcctatttggaaggattg
gcaacgccgtatgcaccggaaaaatgggaagcgacctttagccaacaaatctggccgcga
gttaaaggccaattgctgcaaatagccaccagtttgactcaggcgtcagcgttagccaat
caactgccaaatccaatttggtatcagcaaattcaggctgatcttgccccattgcaaaca
ctattagaaacaaatgcacccacatacgatacagtccgcagtgtcttgatttcccatgaa
tttgctgcttggtcgcgcatcagtaaaggactggatgacgcagataaggacactaaaaac
gcggcaaaagatctacgtgatgctgcaaagaaaacttggcagaacaaactggcaccaact
tttgccttagctgctgagcaaattggcgatttgttgcgggaagctcaacctttagtggcc
acattagctaatgtggccttaaagtttgaagacgcgttgaccgctgaaaaggccgctcgg
catgttcaagactatagtgatattgcgcataatgctttacgcattttgcaacaaaaagat
ccgcaaaccggtgcaccaattgccgataactatcgcgcgagtttcgatgaagtgatggtg
gatgagtatcaggacattagtccgttgcaggaggctttacttgccgctgtcagcaccacc
acaccaggtgatcgattcatggtcggggatgtcaaacagagtatttacggattccgactg
gccgatccgcaattatttattcataaataccaaacatttcaagatgcaccgaccgatccc
gccgcaccagaacggattattttagctgagaattttcgttcgaccaaaaatgtgttggcg
tttaccaatctgattttcagtcaaatcatggatccggaagttggcgatttgagctatgac
aacgcagcggctttaaagtatggtgcgcttgattacggtgatgcgcatccggcagtgaaa
gtgttgttgtatagcaaagcaacatctgatgaagattcttctgatgcaagtgagttaccg
ggagatgctgatgataacgagccagtggacattgcgactggccaaacgcagctagtcttg
gccgaaattcagcgattaatcaatgatcccgatgcgcaactatgggatcgtcaggcgcag
gagtatcggcgcatccactatcgcgatatcacattactgacgcgtcaaaccagtcaaaac
agtctgattcaaacacagtttgctgcagcaggagtcccattgtttgtggccgataccaag
aattttttcaaaacgactgaattgatggttatgctggcgcttttaaaagtgattgataac
caaaaacaagatattccgttagtggctgtgttgcgttcgccgattgttggtttgtcagct
gatcagttggcactgattcgtttagcggcaaaacaggtgccatattatgatgccgtgaca
gcatttctacaagccgaaccaaaaacgccacttgcccagcggacgcatgacatgctgacg
cacttcttcaaccagctcagccattttcgcgacttggcgcgagaaaatgacttggtcact
ttgttgtgggctatctatcaggataccggatttcttgactatgttggcggcaccccaggg
ggcagtcagcgacaggcaaatctccaagccttgattgatcgagcccgcacttatgaagcg
ggtggcttcaaagggttatttgcctttattcactttattactttgatgcagaagcaggat
caagatttggcaatgcctgcccaagtcgatccagataatgatgcggtgaagttgatgacc
attcacaaaagcaagggtttggaattcccggttgtctttttgatgcaggcaaacaaacat
tttaatatgcgcgatcaaaccggcactgccattttgacaaaacaaggtatcggtattaaa
tggctagatcctgaaactcgcgttgaatatgaattaccccagtatcaagctgccaaagct
gcacggcaaaatcagaccttggctgaagagatgcggttgttgtatgttgctctgacgcgt
gcgcaacagcgactttacgtggttggcgcaacgatgagtggcaatcagctgacgtctgct
gataaaacggtcgaaaaatgggctgcggcggcggaaggtgaagcgcgtgttttggcgccg
caagtccgcagtggggcaacgagctatctcgactggatcggaccggccttgatcagacat
ccacaggcccgtgggttagccgaaacaactatcaaacctgcgctcgtcggtgatgaaacg
gagtttacaattgaaattgacgtgaatccgcaagtcacaccgactgcaactccggaaaaa
gtttctgacgattcaggaacaatggtcgacttatctgcgtggtttaaaaaggcctatcct
ttccaagcagcaacaactacgacaggttttcaaagtgtttcagaaattaaacgcgcattt
gatgatccagataccattgatctggtcaatgcagatcggttcctcggtcccaagccaccg
atgcgggatttaacggcgccagcgtttctgaccgaaacccctagtggcatcagcccagca
gctattgggacggcaacgcatctattgctgcagctagtggatctcgccaagccgatcacc
atggccagcttgagggctttgcgcgatcaattgaccaccacgcaggtcattgcggtcgat
gtggcaaagcacattgatttgacggcacttattcgcttctttgaaactgatttaggtcgg
ttgttattggctaagccgcagcaggttcatcgtgaagttccgttttccatgctgctgcct
gctgaccaggtttttgaagcattggccgatgacccaggcgaggacgtcttgattcacggg
attattgatggatacgtgagtgatgaacaaggcgtcacgctgtttgactacaaaactgat
cataacccgaacacggccgttttagtggatcgttatcgtggacagttaaacttatatgca
caagctttgcaggatttacaacccaaaccggtgctgcatcgctatctggtctttttgcgc
accggaaccgttgtcgatctggtagcatcaggtgctggtaaatag
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