Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842: Ldb0837
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Entry
Ldb0837 CDS
T00364
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit (DnaE)
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ldb
Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842
Pathway
ldb03030
DNA replication
ldb03430
Mismatch repair
ldb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ldb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Ldb0837 (dnaE)
03430 Mismatch repair
Ldb0837 (dnaE)
03440 Homologous recombination
Ldb0837 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ldb03032
]
Ldb0837 (dnaE)
03400 DNA repair and recombination proteins [BR:
ldb03400
]
Ldb0837 (dnaE)
Enzymes [BR:
ldb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Ldb0837 (dnaE)
DNA replication proteins [BR:
ldb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Ldb0837 (dnaE)
DNA repair and recombination proteins [BR:
ldb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Ldb0837 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
CAI97659
UniProt:
Q1GAL2
LinkDB
All DBs
Position
723776..727255
Genome browser
AA seq
1159 aa
AA seq
DB search
MQTISANTILASPMKTADLVQGAKERGYSAVALTDINVTFGLADFYQEAVKAGIKPLLGL
QGRFKGIELEEAEYDLVFLAQSQKGYKSLMRLSSFLNIASGDLAGPAPSLADLPELSDLT
VIVPAGLTSELRQLNKLRNSGEEYVKKLQAFLPKGLPLYLGVYPAESAAAYDAYVKKLAE
ISALPITVVEDVRYLDPGDQFLCKVLQAIKERRVLDEHELTLMAQGQGSHWLRPAPVLED
ACREMGLEEALANSGKIAASCQAKIPFKEPQLPVFPQATGLSSDQYLEKLAFAGMEKLGL
RQGIYHARLQKELAVIQQMGFADYFLIVGDIVNYCRQKGALVGPGRGSAAGSLVAYALGI
TQIDPLKYDLLFERFLNPARADMPDIDLDFTTSGRKLAFAYVQEKYGVKARFGEGSDLVA
RILALTTMKAKSVLERTGQVFGLTLPAIARLKQAMGAAKTLAEAGQQAEFKALVAASPLT
RLLYQTAARLEGLPEDTGTHAPGLVISEEPLSRQIGLMTGKEAPLWTVEQTKKYVEKYGL
LKIDFLTLDNLELLEGVLAEIQKSSGPLDLTRLPLDDPDTLRLFARGETQQIFQFNSSGM
QEVLRKIQPRTFDDLSVAVALYRPGPIASIPLYVARKNGTSPVQYPDPSLKEVLGPTYGI
FVYQEQVMQTARIFAGFSLAEADIFRNAISKKQAGLLAEEKDKFVAGAVRKGHSRQAAEA
VYALIEPFANYGFNHSHAVAYALLAYWQAFLSVHFPREFYLEKLRASRGKEKGAIIRQAR
KAGVEILGPDINLSRAEARLFEGRIYLGLKDIMGITPAFLDQLLALKRPVTSFTAFLRQL
DTKELKEKQLVPLIEAGLFDQVSPNRASLLVNCGNMLNTARLSQKSLVLQDFLAAKEENV
PMPTAAEKVAMEERAMGFAVTASPLEIAGKALAKRYGAKPFAGLALNETGQVLAQFIKKN
DWRVKRGARAGELGSNAVFSDGQTSEKVTIFTSQYRRFAQILKENAVYLLQVDKKEDQKD
SRGYQLILQDLRLLDLKQLEQAEEVKPVTVKPKDLALERYFDQYYRTKRLGDFQVKERGQ
ALAKLLAVRYQEDKRGRKMATLILADSSGRYRCWLFAGELAKLTLNLQVNDYYLLKLEAL
GQRKSLDFKIWDMKQVNLR
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
ttgcagacgatttcggccaataccattctggccagcccaatgaaaacggctgacctggtc
cagggggcaaaagagcggggttatagcgccgtggcactgacggacatcaatgtaactttt
ggcctggccgacttttaccaggaagccgtaaaagcagggatcaagccccttttgggcctg
cagggccgctttaagggaatcgaattggaagaagcagaatatgacctggtctttttggct
caaagtcaaaaaggctacaagtccttgatgcgcctgtccagctttttaaatatcgcttct
ggcgaccttgccggcccggcgcctagcctggctgacctgcccgaattgtctgacttgacc
gtgatcgtgccggccgggctgaccagcgaactgcgccagcttaataaactgaggaacagt
ggtgaggaatatgttaaaaagctccaggcctttttgccaaaaggcctgcccttatactta
ggcgtttacccggctgaatccgcggccgcttatgatgcctatgtcaaaaagctggcagaa
atttcagccttgcccatcacggttgttgaggacgtccgctacttagacccgggtgaccag
tttctttgcaaggtcctgcaggccattaaggaaagacgggtcctggatgagcatgaactg
accttgatggcgcaggggcaggggtcacattggctgcggcccgcgcctgtcctggaagat
gcctgccgggaaatgggcttagaagaagctttggccaacagcggcaagatcgcggccagc
tgccaggctaagattccttttaaggagccccagctgccggtctttccgcaagcaacagga
ctttcttccgaccaatatttggaaaagctggcttttgccggcatggaaaaattaggcctt
aggcagggaatttaccacgcccgcttgcaaaaggaactggccgtcatccagcagatgggc
tttgctgactactttttgatcgtcggcgacatcgtcaattactgccggcaaaaaggcgcc
ctggtcggcccgggccgggggtcagctgccgggtccttggtagcctatgctttaggcatt
acccaaattgaccccttaaaatacgacctgctctttgagcgcttcttaaaccccgcccgg
gccgacatgcccgacatcgacttggactttaccacgagcggacgaaagctggcttttgct
tacgtgcaggaaaaatacggtgttaaagcccgctttggcgagggctctgacctggtggct
cggattttggccttgacgaccatgaaggccaaaagcgtccttgagcggaccggccaggtc
tttggcttaaccctgccggctatcgcccgcctcaagcaggccatgggggcagccaaaact
ttggccgaagctggccagcaggctgaatttaaggccctggtcgctgccagtcccttgacc
cgccttctttatcaaaccgccgcaaggctggaagggctgccggaagacacgggcacccac
gctcccggcctggtcatcagtgaagagcccctatccaggcagatcggcttgatgactggg
aaagaagcccctctgtggacggttgagcagaccaaaaagtacgttgaaaagtatggtctc
ttaaagatcgactttctgaccctggacaatttggaacttttggaaggcgttttagcagag
attcaaaagtccagcggccccctggatttgacccggctgcccctggatgatccggatacc
ttgcgcctttttgcccgcggggagacccagcagatcttccagtttaattctagcgggatg
caggaggtcttaagaaaaatccagccccggacttttgacgacttgtctgtcgccgtggcc
ctttaccggccgggcccgatcgccagcatccccttgtacgtcgcccggaaaaacgggacc
agcccggttcagtatcctgaccccagcttaaaagaagtcctgggaccgacctatggtatt
ttcgtctaccaggagcaggtcatgcagacggcccggattttcgcgggcttcagcctggcg
gaggctgacatcttccggaacgcgatttccaaaaagcaggctggcctcttagccgaagaa
aaggacaagtttgtcgctggcgctgtcagaaagggacacagccggcaagccgccgaggca
gtctacgccttaatcgagcctttcgccaactacggcttcaaccactcccacgccgtcgcc
tatgcccttttggcctactggcaggccttcttgtctgtccatttccctagggagttctac
ttggaaaagctccgggccagccggggcaaggaaaaaggggccattatccgccaggccaga
aaggccggcgttgagatcctggggcccgacatcaacttgagccgggcagaggcccgtttg
tttgaaggccggatctacctgggcttaaaggacattatggggattacgccggcctttttg
gaccagcttctggccctaaaacggccagtaaccagcttcacggcttttttgcggcagctg
gataccaaggaattgaaagaaaagcagctggtccccttgatcgaagccggcctctttgac
caggtcagtcccaaccgggccagtcttttggtcaactgcggcaacatgctcaatactgcc
cgcttgtcgcaaaaaagcctggtcttgcaggactttttggccgccaaggaagaaaacgtg
ccaatgccgacggcagcagaaaaggtggctatggaagaaagagccatgggctttgccgta
acggcatctcccctggaaattgccggcaaggccctggccaagcgttatggggccaagcct
tttgctggtcttgccttaaacgagaccgggcaggtgcttgcccagttcattaagaaaaac
gactggcgggtcaagcggggagcccgggccggtgagttaggcagcaacgccgtctttagc
gatggacagaccagcgagaaggtgaccatttttaccagccagtaccgccgctttgcccaa
attctgaaagaaaacgccgtctacctcctgcaagttgacaaaaaagaagaccaaaaggac
agccggggctaccagctgatcttgcaggatttgcgccttttggacttaaagcagctcgag
caggctgaagaagtcaagccggttaccgtcaagcctaaggacctggctcttgagcgttat
tttgaccagtactaccggaccaagcgcttaggcgacttccaggttaaagaaaggggccag
gccctggccaagcttttggctgtccgctaccaggaagacaagcggggacggaagatggcg
accttgattctggctgattcttccggccgttacaggtgctggctttttgccggggaactg
gccaaattaactttgaatttacaggtaaatgactactacctgctcaagctggaagcttta
ggccaaagaaagagcctggacttcaaaatttgggacatgaagcaggtaaatttgcgctga
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