Leishmania donovani: LDBPK_130390
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Entry
LDBPK_130390 CDS
T02289
Name
(RefSeq) RNA helicase, putative
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
ldo
Leishmania donovani
Brite
KEGG Orthology (KO) [BR:
ldo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ldo03400
]
LDBPK_130390
Enzymes [BR:
ldo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LDBPK_130390
DNA repair and recombination proteins [BR:
ldo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
LDBPK_130390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
WHD_SNRNP200
ResIII
Helicase_C
AAA_30
AAA_19
AAA_22
SWI2_SNF2
Cas3-like_C_2
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
13391075
NCBI-ProteinID:
XP_003859251
UniProt:
E9BBB4
LinkDB
All DBs
Position
13:136852..143355
Genome browser
AA seq
2167 aa
AA seq
DB search
MQSSGPPGKPPWGGGRGPWGANNSSANNAVVQPSFHDRSTRRGPSGKINTTNNSGNNNNQ
PAKQSHAHDSTAEQSIQSGDPMGSPADRKAPDVQARDVGGFYGKEKPTASSRSQQGNRGH
ATASVGSDGGAGAVGTSAAIDATLKRLTVLLNRRFFHSNQQQGVSHQQNSVAQSSLSEDI
FTGGVQTNSFVSECMQAQRPVALLTHSGEPLSPRGDRVGGSGRSAYQAQRKISLDMLLSS
VDDIVSQVYVNFDEDLTKVLLNALDRVTACDTLDQRERTKVRVIDELLEVLGDKHYDLLQ
CVMYRPREVFLRLLEEFCTLEDAGDATTSQSSSGPKGLTVRFVKNNQRSQGQDVVINDAG
KLTDQKWLAHMNRRYRVLMQESELDELFKRDFSVTGSIMPTGATVTKKSGHVRIHIPPPR
QEILPESKRVCVATSLPEWTHPAFLSITHLNTIQTTIFETAFHTSQNMLVCAPTGAGKTV
CGLLVMLRCISEHFEGGVLDRDFKIIFVAPMKALAQEMVENFSRRLAPFMIKVRELTGDM
QLTKRELAETQVIVTTPEKWDVITRKQSNEELVSQVRLIIMDEIHLLNEERGPVLEALVA
RTLRHGELNPEQRVRLVGLSATLPNYKDVANFLQADLREGLKVFGPEYRPVPLEQTFIGL
QNTSGPQKRNKEFELDRLAYEEVVKNVREGHQVMVFVHSRKQTVGLAKYFIEESTRRGEE
HLFQYKGVMPSAIEKKGRTLQGRDLTSLFAAGFGAHHAGLVRYDRTTTEGFFRDGYLRVL
CCTSTLAWGVNLPAHTVVIRGTQMYDPKRGGLVSISVLDVMQIFGRAGRPQFDTSGHGII
ISDDKEVSHFLRLIAHALPIESQMQGKLCDHLNAEVNAGTISSVMEASSWLEYTYMWQRI
RVNPLTYGLKVNNVRKDPELKTVRYSMINTSFTELAIAGMVRYNPETGSVESTDLGRLAS
HYYITYESISIFNEKMRRPDDTWIDALDMGTAMNIAASAKEFSQLKVRQEELDELQNLHQ
LLPKHVREYRVSGESADETSTQWKVTTLLKAYINRLSVETHSLSSDMLYVLQNMPRICRA
LFEIELERGHPLTTYTYLTLCKCIEHRCWDFEHPLMQFANWSHRVNITDAVWMNLNKCNP
SMQLLQEMTAKEVGEMVHNVRAGRDIADLVSKFPSVNIDIDVQPITRSILRVKVTIEADF
VWSRDLSGNSEVFWLLVEDQDNHFIFHHESVTLTRKEVETGTPHVVNLAVPIVPQYDMYA
VRLYSDRWMGCKEDYTFSIGHLHLPEDSQMTTKLLPLSPLRLHVIPEEYHAMYRNYRQFN
AVQTQIFYTMFHTDQNVFLGAPTGSGKTIAAEMAILRVFEQYPGKKVVYIAPLKALVKER
LRDWKARMMLVGRSVVELSGDATPDISALAKADILCTTPEKWDGISRNWQVRSYVTAVKL
VVFDEVHMLGTDRGPILEVIVSRMRYIGWNRKAPIRLVGLSTAVSNPGDLSSWLGVEKKW
AVFNFDPSVRPVPMTVHIAGYHGKNYCPRMATMNKPTYNAICEKSPTQPVIVFVSSRRQT
RLTAMALIGFLLMEGNTAKWVHMNVDQVQEYTSKLDDPYVKHCLQFGVGIHHAGLLEGDR
TIVEEAFLSNRIQVLVATSTLAWGVNFPAHMVVVKGTEYYDAKTNSYVDFPITDVLQMIG
RAGRPQFDTEGVAQVLCHEPKKGFYRKFLYDPFPVESALHKQLHVHINAEIVSGTINTRQ
DAVNYLTWTYLFRRIARNPSYYGLEDGSPKAVTIFLSTLVKGVLADLERCGCIEQPDAMD
EDADPDAIQYTVLGKLCSYYYISHITVDLFNRNIEPDHSCGELLRLLCDAEEFNELPVRH
NEDKLNMELARQLPLPVRDAEADSPHAKAFLLFQALFERAPMPITDYITDQKSAMDNAVR
VIQAMVDVAANNGHLYAALRCMTLMQCMVQARWWDDNSLLQIPNVVKAMLPVIEKECDGV
RHAAELANRPLAVLQKFQKVLEMPVFGLRERDVNESMEAVRGLPLIQVDLTIQQQHPAAA
EEMNAEDEETVVTYELAVHLQRLSFGQKSVIAPHFSKAKDEQYWVVVGHEPTGELVALKR
VNRLRQSSTATLRIDWDEDWVQYSPDGTVELNLYLVCDSYIGMDQQYSFILPQFKLSCCS
GGAEGSC
NT seq
6504 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcctctggtccccctggaaaaccgccgtggggcggaggtcgcggcccctggggc
gccaataacagcagcgccaacaacgctgtcgttcagccatcctttcacgacaggagcacc
agaagaggccccagcggaaagatcaacaccaccaacaacagtggcaacaacaacaaccaa
cctgcaaagcagagccacgctcacgacagcacggcagagcagagcatccaaagtggagat
ccgatgggcagcccagcggatcggaaggcgcctgatgtacaggcccgtgacgtggggggc
ttttacgggaaggaaaagccaactgcgagctctcgctcgcagcaaggaaatcgtggccat
gccaccgccagcgtgggcagcgacggcggcgcaggtgctgtggggaccagtgcggcgatc
gatgccacgctgaagcgtctgacggtgcttctcaaccgaaggttcttccactccaatcag
cagcagggggtgtcgcatcagcaaaactctgtggcgcaaagcagcttgtcagaggatatc
tttacgggtggcgtgcagacgaacagcttcgtgtccgagtgcatgcaggcgcagaggccc
gtggcgctgctcacccactctggcgagccgctgtcgccgcgcggcgatcgcgtcggtgga
tctggccgctcggcgtaccaggcgcaacgcaagatttcgctggatatgctactctccagc
gttgacgatatcgtgtcacaggtatacgtgaactttgacgaggatctcaccaaggtgctg
ctcaacgcactcgatcgcgtcacggcgtgcgacacactggatcagagggagcgaacaaag
gtgcgcgtgatcgacgagctgcttgaggtgctcggagacaagcattacgacctgctgcag
tgcgttatgtaccgccctcgcgaggtcttcctccggctcctggaggagttctgcaccttg
gaggatgccggggatgccacgacgagccagtcctctagcggcccgaaggggctgacggtg
cgcttcgtgaagaacaatcagcgctcgcaggggcaggatgtggtgatcaacgacgcgggc
aagctcaccgaccagaagtggcttgcccacatgaacaggcgctaccgtgtcttgatgcag
gagtccgagctggatgagctctttaagcgggacttcagcgtgaccgggtccattatgccg
acaggcgctactgtcaccaaaaagtcggggcacgtgcgcatccacattccccctccaagg
caggagatcttacctgagagcaagcgcgtctgcgttgcgacgtccctgccagagtggaca
cacccagcctttctctccatcacgcacctcaacacgattcagacaacgatctttgagaca
gcgtttcacacatcgcagaacatgctggtgtgcgcgccgacgggtgcgggtaagacggtg
tgtgggctgcttgtgatgctgcggtgcatcagcgagcactttgagggcggtgtgctggat
cgagacttcaagatcatctttgttgccccaatgaaggcgctcgcgcaggagatggttgag
aacttctcgcgccgcctggcaccgttcatgataaaggtgcgcgagcttacgggcgacatg
cagctgaccaagcgggagctggcggagacgcaggtgatcgtgacaacgccggagaagtgg
gacgtcatcacccgcaagcagagcaacgaggagctggtaagccaagtgcggctcatcatc
atggatgagattcatctcctgaacgaagagcgcggcccggtgctagaggcgttggtcgcg
cgcacactgcggcacggcgagctgaatccggagcagcgcgtccgtctggtgggcctctcc
gccacgctgcccaactacaaggacgtggcgaacttcctgcaggcggacttgcgggagggt
ctgaaggtgttcggcccggagtatcgccctgtcccgctggagcagacatttattggcctg
caaaacacatctgggccgcagaagcgcaacaaggagttcgagctcgatcgcctggcgtat
gaggaggtggtgaagaatgtgcgggaggggcaccaggtaatggtgtttgtgcactcgcgg
aagcagacggtggggctggccaagtactttatcgaggagtcgacgcgccgtggggaggag
cacctgtttcagtacaaaggtgtcatgccctcagcgatcgagaagaagggccgcacgctc
cagggacgcgacttgacctcgttattcgccgcgggctttggcgcgcaccacgccggcctc
gttcgctacgaccgcaccactaccgaaggcttcttcagggacgggtacttgcgagtgctg
tgctgcacgagtaccctggcgtggggtgtgaacctgccggcgcacacggtggtcattcgc
ggcacgcaaatgtacgaccccaagcgcggtggcctcgtctccatttcggtgctggatgtg
atgcagatcttcggccgcgctggtcgtccgcagttcgacacgagcggacatggcatcatc
atctcagatgacaaggaggtgagccacttcctccggctcatcgcacacgccctgcctatc
gagagccagatgcaaggtaagctgtgcgaccacctgaacgccgaggtgaacgccggcacg
atatcctccgtgatggaggcctcctcgtggctggagtacacgtacatgtggcagcggatt
cgggtgaatccgctgacgtacgggctgaaggtgaacaatgttcgcaaagacccggagctc
aagacagtgcggtacagtatgatcaacacttcgttcaccgaactcgccattgcgggcatg
gtgcgctacaacccggagacgggctcggtggagagcaccgatctcggccgtctcgcgagc
cactactacatcacctacgagagtatcagtatattcaacgagaagatgcgccgccccgat
gacacgtggatcgacgcgttggacatgggcaccgccatgaacatcgccgcctcggcaaag
gagttcagccagctgaaagtgcggcaggaggagctggatgagctgcagaacctgcaccag
ctgctgccgaagcatgtgcgtgagtaccgggtgagtggcgagagcgccgacgagacaagc
acgcagtggaaggtgacgacgttgctcaaggcgtacattaaccgcctttctgttgagacg
cattctctgtcctccgacatgttgtacgtgctgcagaacatgccccgcatctgccgcgcc
ctcttcgagattgagctggagcgtggccaccccctcaccacgtacacgtacttgacgttg
tgcaagtgcattgagcaccgctgctgggactttgagcacccgctgatgcagttcgcgaat
tggagccaccgggtgaacatcacagacgcggtgtggatgaacctgaacaagtgcaacccg
agcatgcagctgctgcaagagatgacggcgaaggaggtgggggagatggtgcacaacgtg
cgcgccggtcgcgacattgccgatctggtgtcgaagtttccctcggtgaacatcgacatt
gatgtgcagcccatcacccgctccatcctgcgcgtcaaggtgacgattgaggcggatttt
gtgtggagtcgcgacttgtccggcaactccgaggtgttctggctgctggtggaggaccag
gacaaccacttcatcttccaccacgagtcggtcacgctcacacgcaaggaggtggagacc
ggcacgccgcacgtggtgaatcttgctgttccgattgtgccccagtacgacatgtacgcg
gtgcgcctctacagtgaccgctggatgggctgcaaggaggactacaccttctccatcggc
cacctgcaccttccggaggactcgcagatgacgacgaagctgctgccgctgagcccgctt
cggctgcacgtgatcccggaggagtaccatgctatgtaccgaaactaccgccagttcaac
gcggtgcagacgcaaatcttctacaccatgtttcacacagaccagaacgtcttccttggt
gcgccgacgggcagtggtaagacgattgcggcagagatggccatcctccgcgtgtttgag
cagtatcccgggaagaaggtggtgtatattgcgccgctcaaggcccttgtgaaggagcgg
ctgcgtgactggaaggcccgcatgatgcttgtggggcgctccgtggtggagctgtcgggt
gatgcgacgccggacattagcgcgctcgccaaggcggacatcttgtgcacgactccggag
aagtgggatggcatttcgcgtaactggcaggtgcgcagctacgtcacggccgtgaagctg
gttgtgtttgatgaggtgcacatgctgggcaccgaccgtggtccgattctggaggtgatt
gtgagccgcatgcgctacatcgggtggaaccggaaggcgccgatccgcttggtaggtctc
tccacggccgtctcgaacccgggcgacctgagctcgtggcttggtgtggagaagaagtgg
gccgtgttcaactttgacccgtcagtgcgtccggtgccgatgaccgtgcacattgcgggc
taccatggcaagaactactgcccccgcatggccaccatgaacaagccgacgtacaacgcc
atttgcgagaagagcccaacgcagccggtgattgtgttcgtctcgtcgcggcggcagacg
cgactgacggccatggccctcatcggcttcctgctgatggagggcaacacggccaagtgg
gtgcacatgaatgtggatcaggtgcaggagtacacctcaaagctggatgacccgtacgtg
aagcactgcctgcagttcggcgtcggcatccaccacgccgggttgctggagggcgaccgc
acgattgtggaggaggccttcctgtcaaatcgcattcaggttctggtagcgacgtcgacc
ttggcgtggggtgtcaacttccctgcgcacatggttgtggtgaagggcaccgagtactac
gacgccaagacaaactcctacgtggacttcccgatcacggatgtgctgcaaatgatcggc
cgtgccgggcgtccgcagtttgacacggagggcgtggcccaggtgctgtgccacgagccg
aagaagggcttctaccgcaagttcctctacgaccctttcccggtggagagcgcgctgcac
aagcagctgcacgtccacatcaatgccgaaattgtgtcggggacgatcaacactcgtcag
gatgcagtgaactacctgacgtggacctacctctttcgccgaattgcacgcaacccctcc
tactacggcctggaggacggctctcccaaggcggtcaccatcttcctctccaccctggtg
aagggcgtgctggcggaccttgagcggtgcggctgtattgaacagccggatgcaatggac
gaggatgccgacccggatgcgattcagtacaccgtcctaggcaagctgtgttcgtactac
tacatctcccacatcacggtggacttgttcaaccgcaacatcgagccggatcactcctgc
ggcgagcttctgcgtctactgtgcgacgcggaggagttcaacgagttgccggtgcgccac
aacgaagacaagctgaacatggaactggcgcgtcagctgccgctgcctgtccgcgacgca
gaggcggacagtccgcatgccaaggcgttcctcctcttccaggcgctctttgagcgtgcg
ccgatgcctatcactgactacattacagatcagaagtccgccatggacaacgcagtgcgt
gtgattcaggccatggtggacgtggccgccaacaacggccacctgtacgccgcgctgcgt
tgcatgacgctcatgcagtgtatggtgcaggcccgctggtgggacgataactctctgctg
cagatcccgaatgtagtcaaggcgatgcttccggtgattgaaaaggagtgcgacggggta
cgtcacgcggcggagctggcgaaccgcccgttggcagtgctgcagaagttccagaaggtg
ctcgagatgcccgtattcgggctgcgagagcgggacgtgaacgagtcgatggaggcggtg
cgcgggctgccgctcatccaggtcgacctcaccattcagcagcagcatcctgctgcagcg
gaggaaatgaatgcggaagacgaggagaccgtcgtgacgtacgagctggcggtgcatctg
cagcggctttccttcggacagaagagcgtcatcgcgccgcacttctcgaaggccaaggat
gagcagtactgggtagttgtcggccacgagccgacaggcgagcttgttgcgttgaagcgt
gtgaatcggctgcgacagagcagcacggcgacgctgcggatcgactgggacgaggactgg
gtgcagtacagccccgacggcaccgtggagctgaatctgtatctcgtgtgtgactcgtat
atcggcatggatcagcagtacagcttcatccttcctcagttcaaactgagctgctgctcc
ggcggcgcagaagggagttgctag
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integrated database retrieval system
