Leclercia sp. LSNIH1: C2U54_00170
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Entry
C2U54_00170 CDS
T05297
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
lei
Leclercia sp. LSNIH1
Brite
KEGG Orthology (KO) [BR:
lei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lei03036
]
C2U54_00170 (xerD)
Chromosome and associated proteins [BR:
lei03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
C2U54_00170 (xerD)
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GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Motif
Other DBs
NCBI-ProteinID:
AUU82542
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Position
complement(32036..32932)
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AA seq
298 aa
AA seq
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MEKDLSLIEQFLDALWLEKNLAENTLSAYRRDLAMLVAWLHHHDLSLATAQSDNLQALLA
ERMEGGYKATSSARLLSAMRRLFQHLYREKIRPDDPSAALASPKLPQRLPKDLSEAQVER
LLQSPVVDQPLELRDKAMLEVLYATGLRVSELVGLTMSDISLRQGVVRVIGKGNKERLVP
LGEEAVYWLENYLQHGRPWLLNGVSIDVLFPSQRAQQMTRQTFWHRIKHYATLAGIDSEK
LSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQLHQQHHPRA
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaaggatctctcactcatcgaacagtttctcgatgcgctctggctggagaagaat
cttgccgagaacaccctcagcgcctaccgacgcgatctggcgatgctggtggcatggtta
caccatcatgatctctctctggccacggcccaaagcgacaatttgcaggcgctgcttgcc
gagcggatggaagggggatataaagccaccagttccgcgcggctgctgagcgccatgcgg
cgtctgtttcagcacctttatcgcgagaagatacgccctgatgatcccagtgcggcactg
gcgtcgccaaaactgccccagcgtttgccaaaagatctcagcgaagcgcaagttgagaga
ttattacagtcgccagtggttgaccaaccgctggagttacgcgataaagcgatgctcgaa
gtgctttacgccacaggattacgcgtgtctgaactggtcgggctgacgatgagcgatatc
agtctgcgccagggcgtggtacgggtgatcggtaaaggcaataaagagcgtctggtgccg
ctgggtgaagaggcggtttactggctggagaactatcttcagcatggccgcccctggttg
ctgaacggtgtctccattgacgtgctgtttcccagccagcgcgcgcagcaaatgacacgt
caaaccttctggcatcgcatcaaacattacgccacactggcgggtatcgacagtgaaaaa
ctttcgccgcacgttctgcgtcacgcgtttgcgacccatcttctgaatcacggcgccgat
ctgcgcgtggtccagatgctgcttgggcacagtgacctgtcaacgacgcaaatctacacg
catgtcgcgacggaacgcctgcggcagctacaccaacagcatcacccacgtgcgtga
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