Leishmania sp. Ghana 2012 LV757: 94180158
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Entry
94180158 CDS
T10390
Symbol
GH5_04736
Name
(RefSeq) hypothetical protein
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
leis Leishmania sp. Ghana 2012 LV757
Pathway
leis03040
Spliceosome
leis04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
leis00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
94180158 (GH5_04736)
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
94180158 (GH5_04736)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
leis03041
]
94180158 (GH5_04736)
04121 Ubiquitin system [BR:
leis04121
]
94180158 (GH5_04736)
03400 DNA repair and recombination proteins [BR:
leis03400
]
94180158 (GH5_04736)
Enzymes [BR:
leis01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
94180158 (GH5_04736)
Spliceosome [BR:
leis03041
]
Complex B
Other components
Prp19 complex
94180158 (GH5_04736)
Complex C
Prp19-CDC5 complex
94180158 (GH5_04736)
Ubiquitin system [BR:
leis04121
]
Ubiquitin ligases (E3)
U-box type E3
94180158 (GH5_04736)
DNA repair and recombination proteins [BR:
leis03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
94180158 (GH5_04736)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Prp19
Beta-prop_WDR5
Beta-prop_THOC3
WD40
Beta-prop_EML_2
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_1st
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EIPR1
EIF3I
WD40_RFWD3
zf-Nse
U-box
Beta-prop_SPT8
PALB2_WD40
Beta-prop_TEP1_C
DUF6374
Motif
Other DBs
NCBI-GeneID:
94180158
NCBI-ProteinID:
XP_067700358
LinkDB
All DBs
Position
27:1053869..1055413
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AA seq
514 aa
AA seq
DB search
MLRCNISQRVPTHPVVSIKSGLVFERSLVEKYIDEHGRCPITGDALCRQDLIAAQGAVPD
ASIAASGSLGAASVPTLLERLQTEWEGVALEQFSLRQQVTQLQLELAHALQQYDAACRVI
ARLSKELDTLRGGKALAAEEAYEGAAAVVVPVAVLRRMDIAEAAERQARRQRKVAAAESV
AVAPSQLTEEAQWVATPSLSASASSVRSAVRVAAAADDSSSGIFASAVTGDHAVVRYSPD
SFSEEARGVGHTAAVHTLASQPGGVLLSAAEDQTVRVWSTKGTALTVMHTLRYASGVAAM
SRRTVGGAYVLCGAADGVLTLSDLESGTHVVATAPLTSDAASRALTCVELHPYASLAAVA
LQPSELQLWDAREMRADTVISHVRGATPRTHICSASFSADCVSLAAGLTDGSTYVWDLRQ
VLAPVAVLPPSTDAIPATVRYAPDGLCLVVGGHGVNLYDCARLSASSASMEATATAALRA
GAVCDVCWTTNGTGVLSGAVDGIVRLYSTVPGAV
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgctgcaacatctctcagcgggtgccgacgcacccggtggtatctataaagtcg
gggctcgtctttgagcgcagcctcgtcgagaagtatattgacgagcatggccgatgcccc
atcaccggggatgcgctgtgcaggcaggacctcatagccgcccagggcgctgttccagat
gcgtccatcgcggccagtggcagtcttggggctgcctccgtccctacgcttctggagcgc
ctccagacggagtgggagggggtggcgctggagcagtttagcctccggcagcaggtaacc
cagctgcagttggagctggcccacgcattacagcagtacgacgccgcctgcagggtgatt
gcgcgactcagcaaggagcttgacaccctccgaggaggcaaagctctggctgccgaggag
gcctacgagggcgcagctgcggtggtggtgccggtggcggtgctgcgacgcatggacata
gctgaggcagcggagcgtcaggcacgcagacaacgcaaggtggcggcggccgaatctgtg
gcggtcgcaccgtcgcagctcacggaggaggcgcagtgggtggccacaccatcgttatca
gcctctgcatcgtcggtgcgttcggccgtgcgtgttgcagcggcggcggacgacagcagt
tcgggcatcttcgctagcgccgtcacgggcgatcacgcggttgtgcggtacagccctgac
agcttcagcgaggaggcgcgtggtgtagggcacaccgctgccgtgcacacgctggcgagt
cagccgggcggcgtcctactctccgccgcggaggatcagacggtgcgcgtgtggtcgacg
aagggcactgcgctgacggttatgcacacgctgcggtatgcgagcggagtggctgcgatg
agtcggcggactgtgggtggggcttatgtgctctgcggcgccgcggatggtgttctcacc
ctctccgacttggagagcggcacacacgttgtggcgacggcgccgctgacgagcgatgcg
gcgtcgcgggcgctgacgtgcgtggagcttcacccatacgcatctcttgcggccgtggct
ctccagccgagtgagctacagctctgggatgcgcgtgagatgcgcgccgacaccgtgatt
tcccacgtgcgaggcgctactccgcgtacgcacatctgcagcgccagctttagtgccgac
tgtgtgtccctcgcggctggcctcacggatggctcgacgtacgtctgggacctccgccag
gtgctggccccagtagcagtgctaccgcccagcactgacgctatcccagccacggtgcgc
tacgccccagacggactctgtctcgtcgttggcggacacggcgtaaatttatacgactgc
gcacgcctgtccgcctcgtctgcttcgatggaggccactgcaacggcagcacttcgggcg
ggtgccgtgtgcgacgtgtgctggacgacgaatggcacgggcgtgctgagcggcgccgtc
gacggcatcgtgcgcctgtactccaccgtacccggtgcagtgtag
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