Leifsonia sp. ZF2019: IT072_20525
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Entry
IT072_20525 CDS
T10186
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
leiz Leifsonia sp. ZF2019
Pathway
leiz00470
D-Amino acid metabolism
leiz00550
Peptidoglycan biosynthesis
leiz01100
Metabolic pathways
leiz01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
leiz00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
IT072_20525
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
IT072_20525
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
IT072_20525
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
leiz01011
]
IT072_20525
Enzymes [BR:
leiz01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
IT072_20525
Peptidoglycan biosynthesis and degradation proteins [BR:
leiz01011
]
Precursor biosynthesis
Amino acid ligase
IT072_20525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
ATP-grasp
ATPgrasp_ST
ATP-grasp_4
CPSase_L_D2
GARS_A
ATPgrasp_YheCD
TTL
Motif
Other DBs
NCBI-ProteinID:
UAJ79532
LinkDB
All DBs
Position
4232958..4233923
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AA seq
321 aa
AA seq
DB search
MAEKEALDALDIVVLAGGISHERDISLRSGRRVADGLNSLGHRVTVREPDGELLGFLTGS
RPDVVWPALHGASGEDGALRALLELTGIPFVGSRTDSSRLAWSKPTAKTIVGRAGVATPD
SVTLPKETFRELGANSVLSAVIAGLGMPVVVKPAQGGSAQGVTIVASADELPRAMVDAYT
YSEIALIERKVEGVEVSVAVIDSGSGAEALPAVEIEPVDGVYSFDARYNAGETRFYVPAR
LAPEVGEAVAAAASAAHEALGLRHLSRIDLIVDDAGVPWFLEANVLPGLTETSIMPQAIA
ASGRDLGEVYAALAVAAIAEG
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaaagaagccctcgacgccctcgatatcgtcgtgctcgccggcgggatctcg
cacgagcgcgacatctccctccgcagcggtcgccgggtcgcagacggcctgaactcgctg
ggccaccgcgtcaccgtgcgcgagcccgacggggagctgctcggcttcctgaccgggtcg
cgcccggatgtcgtctggcccgcactgcacggcgccagcggcgaagacggcgcgctgcgt
gcccttctcgagttgaccgggatccccttcgtcggttcacggaccgattcgtcccggctg
gcgtggtcgaagcccaccgccaagacgatcgtcggccgcgcgggcgtcgccaccccggac
tccgtgacgctcccgaaggagaccttccgcgagctgggcgcgaacagcgtgctctccgcc
gtcatcgccgggctgggcatgcccgtcgtcgtgaagcccgctcagggcggctcggcgcag
ggcgtgaccatcgtcgcctccgccgacgagctcccgcgtgccatggtggatgcgtacacc
tactccgagatcgcgctcatcgagcgcaaggtcgagggtgtggaagtgtcggtcgccgtg
atcgattccgggtcgggcgcggaggcgctcccggcggtcgagatcgagcccgtcgacggg
gtctactcgttcgatgcccgctacaacgcgggagagacccgtttctatgtgccggcacgg
ctcgccccggaggtcggggaagccgtcgcggcggccgcctcggctgctcacgaggcgctc
ggcctgcggcacctgtcgcggatcgacctgatcgtggacgatgccggcgtgccgtggttc
ctcgaggcgaatgtcttgccggggctcaccgagacgtcgatcatgccgcaggcgatcgcc
gcctccgggcgcgacctcggcgaggtctacgccgcactcgcggtcgcagcgatagcggag
ggatag
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