Lodderomyces elongisporus: PVL30_000597
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Entry
PVL30_000597 CDS
T01116
Symbol
RPC40
Name
(RefSeq) DNA-directed RNA polymerase core subunit rpc40
KO
K03027
DNA-directed RNA polymerases I and III subunit RPAC1
Organism
lel
Lodderomyces elongisporus
Pathway
lel03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lel00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PVL30_000597 (RPC40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lel03021
]
PVL30_000597 (RPC40)
Transcription machinery [BR:
lel03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
PVL30_000597 (RPC40)
RNA polymerase I system
RNA polymerase I
PVL30_000597 (RPC40)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
Motif
Other DBs
NCBI-GeneID:
5235895
NCBI-ProteinID:
XP_001528095
UniProt:
A5DTC9
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Position
1:1682484..1683494
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AA seq
336 aa
AA seq
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MSDNNIVGIEYNRVTNTASTDFPGHQQHGDYSWNIEKFKDSFEIKITNIAERSATFDLIH
VDTSIANAFRRIMIAEVPSVAAETVYSYMNTSVIQDEVLAHRIGLIPLKVDPDSLTWVDK
KLDESERYTEDNTIVLTLDVACSKNLQAPKNSTDPKEMYKNSHVYARDLKFEPQGSQLEK
YKDSPVVPCDPDILLAKLRPGQEISMRVHCILGLGCDHAKFSPVATASYRLLPVIDIKEP
ITGDLARKFQKCFPPGVIGIKDDGEAYVEDARKDTVSREVLRHPEFEGKVKLGRQRDYFI
FNVESTGAMPPCEIFLKSIRVLKSKAEYLRNCPIGQ
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgtctgataacaacatagtagggattgaatacaatcgagtaacaaacaccgcatcaaca
gattttcctggtcatcaacaacatggagactacagctggaacattgagaagtttaaggac
tcctttgagatcaaaatcaccaatatagcagagagaagtgcaacatttgatcttattcat
gtcgatacatccatagctaatgcttttcgtcgtattatgattgctgaagtgccatcggtc
gctgcagaaacagtatacctgtacatgaatacttctgttatacaagacgaggtgctagca
cataggatcggtcttattcctctcaaggtcgaccccgactcattaacctgggtagacaag
aaactcgatgagagtgaacgttacactgaagacaatacaattgttttgacgttggatgtt
gcttgttcaaagaacttgcaagcacctaaaaactccacggatccgaaggaaatgtacaaa
aatagtcacgtgtacgcacgagatttgaagtttgagcctcaaggaagccagttggagaag
tataaggatagtccagttgttccttgtgatccagatattttattggccaaattgagaccg
ggtcaagaaatatcaatgagggtgcattgtattttgggtttgggttgtgaccatgccaaa
ttctcacctgttgccactgcatcgtatagattgttgcctgttatagatatcaaagagcca
ataacaggggatcttgcaagaaaatttcagaaatgtttcccacctggtgtgattggtatt
aaagatgatggagaagcttatgtggaagatgcaagaaaagatactgttagtagagaggtt
ttgagacaccctgaatttgagggtaaagtgaagttgggaagacaaagagactactttatt
ttcaacgttgagtccactggggctatgcctccctgtgaaatatttttgaagagtatcagg
gtattgaagagtaaggctgagtacttgagaaactgtcctattggtcagtaa
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