Lodderomyces elongisporus: PVL30_001120
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Entry
PVL30_001120 CDS
T01116
Symbol
NIC96
Name
(RefSeq) nuclear pore complex subunit
KO
K14309
nuclear pore complex protein Nup93
Organism
lel
Lodderomyces elongisporus
Pathway
lel03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lel00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PVL30_001120 (NIC96)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lel03019
]
PVL30_001120 (NIC96)
Messenger RNA biogenesis [BR:
lel03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
PVL30_001120 (NIC96)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Atrophin-1
Motif
Other DBs
NCBI-GeneID:
5235851
NCBI-ProteinID:
XP_001528631
UniProt:
A5DUW5
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All DBs
Position
1:3115305..3118277
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AA seq
990 aa
AA seq
DB search
MFANKPSTNNSAFGSGFTFGSGAQQQQQQQQQQQQTQAPPLNQPTLSFGSTTQTTINPPT
APSLSNTNIDITASLNTKNSGELLKELLESASNLPKVAVSNSNANLKSIHLTLEELERKS
DQLRKREEKTNNFTRAHYLLAGSGVATGDIEDDLSRIQVPKPKGIANFHNNRHPQPHQSS
ESYVLREDNIEQYLNSKKEENILNTIEQSFELASKDFDNFINANISIDWNKRREDLKKAV
GLKDDQKFKEEALKCSIVWKSKSAAANILTPLHTKVSSSPLVRQCSRDKFEDYARVVYTL
NEARLKDKVFPLCLNFFELNRLQEDSRSKQICEAWKILQGLTGEESAKTTQEQKFFNFKK
PELNNAISQSSKKYLEKEYFKYVEQVYAKSSNKPQQFLPATNINKISFFIHHIIIRNDPE
VLNKTLLVNGTPIWALIYFLLRAGLYEDAAEVVLGNRELFNKFDNNFPTYIKKFVDSSSH
TLPSQLSDRIHQEFNQQFQYVMNDLDLNFESSINFDPYKYSVYKIIGKCDLHNKSVPKAV
NLSIEDWLWFHFAIINENHPNEESSIIYENYGLDNLQNKIIQLGSKHFLSASKTPLYFKV
LVLTGLYELAVQYSYESINETDAVHLAIGLAYFGLLRCSSYSNNNILTIYDNNYEINYSR
LLGAYTTSFKISDPKVACQYLVLIALGQGGKSKEAVSVCHDALRELLLITREFGILIGEV
SPTTGLLERGVLEKQRKLIGLEDIDAFHRQIVEVTAVKCEEEGRIFDALLLYQLSCDYET
TIVLVNKLLAELIATSDLNKPILQFGNSNFMSSGFGPGLSEVEETPENNIILLTEQIWTS
FSKSSKILSSITSSVRHTCELLMSIIKIRNLFVRKEWREVVARIDKLGLLPANSKDDLTR
VRAYSELVENNGLDSNLIKVLPSLLILVMTCVSNINYDILTRKYQPISNEKQEINHWRTI
AKNCMIYAGMVQYKMPREVFSLLINLESSL
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcaaataaaccgagcaccaataattcagcttttgggagcgggttcacttttgga
tccggtgctcagcaacagcagcagcagcaacaacaacagcaacaaacccaagcaccgcca
ttgaatcaaccaactttatcgtttggctctacaacccaaacaacaatcaaccctcctacg
gcaccatcactaagtaacacaaacatagacatcactgcttcgttaaacaccaagaatagt
ggagaacttttgaaagaattactcgagtcagcaagtaatttgcccaaagttgcagtctca
aactccaatgcaaatttaaaatcaatacatctcactttggaggaactcgagcgtaaatct
gaccaattgaggaaaagagaagagaaaacaaacaattttacaagagcccattacctttta
gctggaagcggagtcgcaactggagacattgaagatgacttgagtcgaatccaagtacca
aaacccaaaggtatagcaaactttcacaacaatcgtcaccctcaaccacaccaaagtagt
gaatcgtatgttttgcgtgaagataacattgaacagtacttgaatagcaaaaaagaagag
aatattctcaacacaattgagcaatcttttgaattagcttcaaaagatttcgataatttc
attaatgcaaacatctcaattgattggaataagagacgcgaagatttaaaaaaagccgtg
ggattgaaagatgatcaaaagttcaaggaagaagcactcaagtgctccattgtatggaaa
tccaaatctgcagcagctaacattttgactccattacataccaaagtaagcagctcgcca
ttagttcgccaatgctcaagagacaaatttgaagactacgcaagagtagtttacaccttg
aacgaagcaagattaaaagataaagtttttcccctctgtttgaactttttcgaacttaat
agattacaagaggatctgagatcgaaacagatttgcgaagcttggaaaattcttcaaggt
ttaacaggggaagaaagtgccaaaacaacccaagagcaaaaatttttcaatttcaaaaaa
ccagagttgaacaatgccattctgcaaagcagtaagaaatacttagagaaggaatacttc
aagtatgttgaacaagtttacgcaaaaagtagcaacaaaccacaacagtttcttcctgct
actaatattaacaaaatctcattttttattcatcacatcatcattagaaatgaccccgag
gtgctcaacaaaacgttattggtgaatggcactcctatttgggcattaatatacttttta
ttgcgtgctgggttgtatgaggatgcagccgaggtggtccttggcaatagagagcttttt
aacaagtttgataataactttcctacatacatcaaaaagtttgtcgacagttcatcgcac
acattgccttctcaattgagtgataggatacaccaggaatttaaccagcagttccaatat
gtcatgaacgatctcgatctcaactttgaactgagtataaatttcgacccatacaagtac
tccgtctacaaaataattgggaaatgcgacttgcacaacaagtcagtacccaaggctgtg
aacttgagtattgaggattggttgtggttccattttgctattatcaatgaaaatcatcca
aatgaagaatcttccatcatatatgaaaattatgggttggataatttgcaaaacaaaatc
atccaattgggttctaagcatttcttatcggcttcaaagactccgttgtatttcaaagta
cttgtattgactgggttatacgagttggctgtgcaatatagttatgagtcaataaatgaa
accgatgctgtccatttggcaattggtcttgcttattttggtcttttgagatgttcaagt
tatagtaacaacaacatattgacaatttatgacaacaactatgaaataaactacagtcgt
cttttgggggcctataccactagcttcaagatttctgaccccaaagttgcttgtcaatat
ttggttttgattgcattggggcaaggaggtaaactgaaggaagcggtttctgtttgtcat
gatgcgttgagagaacttttgctcatcacaagagagtttggtatactcattggtgaagtg
agtcctaccactggattattggagcgtggtgtattggagaaacaaagaaaattgattggc
ttagaagatattgacgccttccaccgtcaaatagtcgaagttactgcagtgaaatgcgaa
gaagaaggtcgtatttttgatgcacttttgctttaccagttatcgtgcgattacgaaacc
acaatcgtgttggtgaacaagcttcttgcagagttgattgcgacaagtgatttgaataag
ccaattttgcagtttggcaatagcaatttcatgtccagcggctttggtcctggcctcagt
gaagtagaggaaacgccagagaacaacataattttgcttacagagcaaatatggacttcg
ttttctaaaagcagcaagatattgagcagcattacctcgagtgttaggcatacatgcgag
ctccttatgtctatcattaagataagaaatttgtttgttagaaaagaatggcgagaagta
gtcgctcgtattgacaaattgggattacttcctgcaaactccaaagatgatttgactaga
gtcagagcatatagcgaacttgtcgagaacaatggtttggatagcaatcttatcaaagta
ttaccaagtttattgatactcgttatgacatgtgtctccaacatcaactacgatatattg
acgcggaaataccaaccaataagtaacgagaaacaagaaataaatcactggagaactata
gctaagaattgcatgatatacgctggaatggtgcaatacaaaatgcctcgagaagttttc
agtttgttgatcaatttggaaagcctgttgtag
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