Lodderomyces elongisporus: PVL30_002072
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Entry
PVL30_002072 CDS
T01116
Symbol
CLF1
Name
(RefSeq) NineTeen Complex (NTC) component
KO
K12869
crooked neck
Organism
lel
Lodderomyces elongisporus
Pathway
lel03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lel00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PVL30_002072 (CLF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lel03041
]
PVL30_002072 (CLF1)
03036 Chromosome and associated proteins [BR:
lel03036
]
PVL30_002072 (CLF1)
Spliceosome [BR:
lel03041
]
Complex B
Other components
Prp19-related factors
PVL30_002072 (CLF1)
Complex C
PVL30_002072 (CLF1)
Chromosome and associated proteins [BR:
lel03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
PVL30_002072 (CLF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
TPR_14
Suf
HAT
TPR_19
Orthopox_B11R
U3_assoc_6
Motif
Other DBs
NCBI-GeneID:
5234255
NCBI-ProteinID:
XP_001527271
UniProt:
A5DXL3
LinkDB
All DBs
Position
2:complement(2039781..2042081)
Genome browser
AA seq
766 aa
AA seq
DB search
MVAISLNKPLTDKFNMSEQPDAQITSKQIIDDAFNRSNSSSFVRPKQTIQDLEELHAYQQ
TKRKEYEQQLNKNRLNFGQWIRYARWELEHNHDFARARSIMERALDVNVEYIPFWTQYIQ
WELIGKNANHARNLLERATTTLPNVSKLWYLYAQTEEMLKNYSGVRSVFERWLRWRPDEH
AWDAYIRFETRYEEVENARSLFKRYVHAFPHVTTWQKWIDYELENNANDIAIIRAVFEAA
ISDCLMHPSAKQSVDNIAFAKLAALWLKWELKCQELERTKSIRQFLLQDARLRNSTQIQN
ELLIAINEYENIAGDKTSIEASVLEKRKVKYLADVTNDPTNYDSWWSYISILVQENKTEE
VRDLFQKIATLHQPHDEYKSDKWRKYIMIWMRYALWEEFDNRDIDEARRIWNDSVKLLAS
ASKNTFTSGKLWIAFAKFELRSDPENGLVKARKVLGRALGHMNKCGPKTNVLRYYIELEK
TLCEWDRVRSIYQKWVELALLFGADCTSVFKEYLHFELSLEEDARCEALLDTAMNLCKDE
STLESLNRSEITQLAVTYYTDNLKFDKVRDIHRSMVTENPTVTNWVKLALLESTIPTATQ
LEELLQGEDELELSIGPAQIENTREVYREAETFFKNFSFDNNNNSNSNHDTTGSSMESRR
AILESWREYEEVNGDEESIAEVVQKLPKRIKKRKNVNGIEEEYYEYVFPDNTNKTGLAPS
SPSAAPTATSATTSATTSTSISSSSAPPASINKFLENAKKWAAQSS
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atggttgcaatatctttaaataagcctttaacagataaatttaatatgagcgaacaacca
gatgctcagataacaagcaagcaaataatcgatgatgcatttaatagatccaacagttca
tcctttgtgcgaccgaagcaaacgatccaggatctcgaagaacttcatgcttatcaacag
acaaagcgaaaggaatacgaacaacaactaaataaaaacagactcaattttggccagtgg
atacgatatgcacgatgggaactagaacacaatcatgattttgctcgtgcacgttctatt
atggaacgtgctttggatgtcaatgtcgaatacattcccttttggactcagtacatccaa
tgggagttgattggcaagaatgcaaaccatgctaggaacttgctagaacgagcgactacc
actttacctaatgttagtaagctttggtacttgtatgctcaaacagaggagatgttaaag
aattatctgggtgtgcgtagtgtatttgaaagatggctccgttggcgtcccgatgagcat
gcatgggatgcctatattcggtttgaaacacgttatgaggaagtagaaaatgcaaggctg
ctatttaaacgatatgttcacgcatttccccatgttaccacatggcaaaaatggatcgat
tacgagttggagaataatgctaatgatattgctattattcgagcggtctttgaagcagca
attctggattgtttgatgcatccgtctgcgaaacaactggttgacaatattgcatttgcc
aagttggctgctttatggttaaaatgggaattgaaatgccaagaattggagcgaaccaaa
agcatacgccagtttttattgcaagatgcccggttaagaaattctacccaaattcaaaat
gagcttttaatagccattaatgagtatgaaaacatcgcgggagataaaacatcaatcgaa
gcaagtgttttagagaaaagaaaggtaaagtatttggcggatgtcaccaatgatcctaca
aactacgactcatggtggtcatacatttcaatacttgttcaagaaaacaaaacggaagag
gttcgagacctttttcagaaaattgcaactctacatcagccacatgacgaatacaaaagt
gataaatggagaaaatatattatgatatggatgaggtatgctttgtgggaggaattcgat
aacagagatatagacgaagcacgtcgtatttggaatgactctgttaagcttcttgctagc
gctagtaagaacacatttacatcaggaaagctttggattgcatttgccaaattcgaatta
agaagtgatcctgaaaacggacttgttaaagcacggaaggtgctaggaagagccttgggc
cacatgaataaatgtgggcctaaaacaaatgtgttgaggtattatatagaattggaaaaa
accctttgcgaatgggatagagtccgctctatataccagaaatgggttgagttagctctt
ttgtttggtgctgattgcacatcagtttttaaagagtacttgcattttgaactttcgctc
gaggaagatgctcgatgcgaagcattgcttgatactgctatgaatctatgcaaagacgaa
agtaccctagaatctttgaacaggagcgagataactcagcttgctgttacatattataca
gataatttgaaatttgacaaagtgcgggatattcataggtccatggttactgagaatccg
acagtaaccaattgggtcaaattagcgttgttggaatctactatacctacagctactcaa
ctagaagagttgttgcaaggtgaagatgaacttgagttgagcattggacctgcacaaatt
gaaaataccagggaagtgtatcgtgaagcagaaacttttttcaaaaactttagcttcgac
aacaacaacaatagcaacagtaatcatgatactactggcagcagcatggaaagtagaagg
gccattctagagtcatggcgagaatacgaagaagtgaacggagatgaagagagcatagcg
gaagttgttcaaaaattgcccaaaagaatcaaaaagaggaaaaatgtaaatggtattgaa
gaagaatactatgaatatgtttttcctgataatacaaacaaaacagggcttgcaccttcg
tcaccatcagcagccccaacagcaacatcagcaacaacatcagcaacaacatcaacatca
atatcttcttcctcggcacctccagcatcgatcaataagtttttggagaatgcaaagaaa
tgggcagcgcaatcatcataa
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