Lysobacter enzymogenes M497-1: LEN_3450
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Entry
LEN_3450 CDS
T04598
Name
(GenBank) RNA-binding protein Hfq
KO
K03666
host factor-I protein
Organism
lem
Lysobacter enzymogenes M497-1
Pathway
lem02024
Quorum sensing
lem03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LEN_3450
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LEN_3450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lem03019
]
LEN_3450
03036 Chromosome and associated proteins [BR:
lem03036
]
LEN_3450
Messenger RNA biogenesis [BR:
lem03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
LEN_3450
Chromosome and associated proteins [BR:
lem03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
LEN_3450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
BAV98937
UniProt:
A0AAU9AZF7
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All DBs
Position
complement(4279424..4279696)
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AA seq
90 aa
AA seq
DB search
MSKGQSLQDPFLNALRRERVPVSVYLVNGIKLQGTIESFDQFVVLLRNTVSQMVYKHAIS
TVVPARNVRVGPGGGYVQSADGSDGGDENE
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaggggcaatccctgcaggatcctttcctgaatgcgctgcgtcgcgaacgtgtg
ccggtctcggtctacctggtcaacggcatcaagctgcagggcacgatcgaatctttcgac
caattcgtggtgctgttgcgcaacaccgtcagccagatggtctacaagcacgccatctcc
accgtggttcccgcgcgcaacgtccgcgtcggcccgggcggcggctacgtccagtccgcc
gacggcagcgacggcggcgacgagaacgaataa
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