KEGG   Lysobacter enzymogenes M497-1: LEN_3450
Entry
LEN_3450          CDS       T04598                                 
Name
(GenBank) RNA-binding protein Hfq
  KO
K03666  host factor-I protein
Organism
lem  Lysobacter enzymogenes M497-1
Pathway
lem02024  Quorum sensing
lem03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lem00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LEN_3450
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    LEN_3450
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lem03019]
    LEN_3450
   03036 Chromosome and associated proteins [BR:lem03036]
    LEN_3450
Messenger RNA biogenesis [BR:lem03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     LEN_3450
Chromosome and associated proteins [BR:lem03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    LEN_3450
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: BAV98937
UniProt: A0AAU9AZF7
LinkDB
Position
complement(4279424..4279696)
AA seq 90 aa
MSKGQSLQDPFLNALRRERVPVSVYLVNGIKLQGTIESFDQFVVLLRNTVSQMVYKHAIS
TVVPARNVRVGPGGGYVQSADGSDGGDENE
NT seq 273 nt   +upstreamnt  +downstreamnt
atgtctaaggggcaatccctgcaggatcctttcctgaatgcgctgcgtcgcgaacgtgtg
ccggtctcggtctacctggtcaacggcatcaagctgcagggcacgatcgaatctttcgac
caattcgtggtgctgttgcgcaacaccgtcagccagatggtctacaagcacgccatctcc
accgtggttcccgcgcgcaacgtccgcgtcggcccgggcggcggctacgtccagtccgcc
gacggcagcgacggcggcgacgagaacgaataa

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