Leptolyngbya sp. NIES-3755: LEP3755_19000
Help
Entry
LEP3755_19000 CDS
T04199
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
len
Leptolyngbya sp. NIES-3755
Pathway
len03410
Base excision repair
len03430
Mismatch repair
len03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
len00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LEP3755_19000
03430 Mismatch repair
LEP3755_19000
03440 Homologous recombination
LEP3755_19000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
len03400
]
LEP3755_19000
DNA repair and recombination proteins [BR:
len03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
LEP3755_19000
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LEP3755_19000
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LEP3755_19000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
BAU11406
UniProt:
A0A0S3U1Q0
LinkDB
All DBs
Position
1999364..2001316
Genome browser
AA seq
650 aa
AA seq
DB search
MSVRSSIPDQRWSIHPQQPDRAIQLAADTHRSPLLTQILINRGFDTLESIQEFLDPERQE
LPSPLEDFPDLAISLELLINAINDKTRIAICGDYDADGMTSTALLLRALRHLGARVDYAI
PSRMSEGYGINRRIIEDFHEEGIGLILTVDNGIAAHDPIARARELGLTIIVTDHHDLPPT
LPNANAILNPKLISESSPYRGMAGVGVAYVLAVCLAQSFGQTRDLQKSLLELFTLGTIAD
LAPLTGVNRRWVKRGLHLLPKSKMAGIQALIQIAGLSNEKNLKPEAIGFRLGPRINAIGR
LSDPQIVIELLITDDDGVALERAMQCEQVNKQRQQLCEQIEKEAIEAYENSPLDAKDDRV
LLLVKKGWHHGVIGIVASRLVERYGVPVFIGTYEDEHHIRGSARSIPEFNVFEALEFCKD
LMLKAGGHKAAGGFSFEADRLDEIRSRLRTFAHKLLKPEHLKPLVTIDAQADLSQLDLAL
HAQLDALHPCGMENPDPVFWTPNVCLDEQRRIGKGHIKFVLRSGNQKINAIAWRWGEYFP
LPSTLDIAYRLKSNEWNNEVSVQLEVVGVRLPQVQRTEFLFSDRPYTCTLLEQRGIQELR
IQNTKGETLVIQKGQRIGTLGKLNQSMQEIDVSQAPYYDLVKAAVNALRV
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtacgatcgagcattccggatcaacgatggtctattcatcctcaacagccagat
cgtgcgattcagcttgccgcagacactcaccgatcgccgcttctcacgcagattttgatc
aatcgcggctttgacaccctcgaatcgattcaagaatttctcgatccagaacgtcaagag
ctaccttcaccgctagaagatttccccgatcttgcaatcagtttggaactcttgatcaat
gcaatcaatgacaaaactcgaattgcaatttgtggcgattacgatgcggatggaatgacc
agcacagccttgttgctcagagcattacgacacttaggcgcaagagtagattatgcaatt
ccgagtcgaatgagcgaagggtatggaatcaatcgccgtatcatcgaagactttcacgaa
gaaggcattgggctaattctgactgtggataacggcatcgcagcccatgatccgatcgca
cgagccagagaacttggactcacgatcattgttactgatcaccacgatttgccgcctaca
cttccaaatgcgaatgcgattctcaatccgaagctaatttcggagtcatccccatatcgt
ggaatggctggagtcggtgttgcgtatgttcttgccgtctgtctagctcagagttttgga
caaacgcgagacttacagaaatctttgttagagctattcacattaggcacgatcgctgat
ttagctcccctcaccggagtcaatcgtcgctgggtaaaacgcggcttacatctcttgcca
aaatccaaaatggcaggcattcaagctctgattcaaattgcaggtttgagcaatgagaaa
aatctgaaacctgaagcgatcggctttcgattgggtccgcgaattaatgcgatcgggcgt
ttatctgatccgcaaatcgtgatcgaactcttaattaccgatgatgatggagtcgcatta
gaacgcgccatgcaatgcgaacaggtgaacaaacaacgtcaacaattgtgtgaacaaatc
gagaaagaagcgatcgaggcttacgaaaatagtccgctcgatgcaaaagacgatcgtgtt
ctattgctggtaaaaaaaggttggcatcatggcgtaatcgggattgttgcttctcgatta
gtcgaacgttatggagttccagttttcatcggaacttacgaagatgagcatcacattcgc
ggttctgcccgaagcattccagaattcaatgtgtttgaagccttagaattctgcaaagat
ctgatgctgaaagcgggagggcacaaagcagcaggcggattttcgtttgaagccgatcga
ttagatgagattcgatcgagattaagaacgtttgcacacaaattactcaaacccgaacac
ttgaagcctctggtgacgatcgatgctcaagccgatctgtctcaactcgatttagcgctt
catgctcaactcgatgcccttcacccttgcggcatggagaatcccgatccagtgttttgg
acaccgaacgtttgccttgatgagcaacgacgaatcggtaaagggcatatcaaatttgta
ttgcgatcgggaaatcagaaaattaatgcgatcgcgtggcgttggggtgaatatttcccg
cttccgagcacgttagatattgcttaccgattgaaatcgaatgaatggaacaacgaagtt
tcagtgcaattagaagtggtcggcgttcggttgcctcaagttcaacggacagaattttta
tttagcgatcgaccgtatacctgtacgttgctcgaacagcgtggaattcaagaactgaga
atccagaacacaaaaggtgaaactttagtcatccaaaaaggacaaagaattggaacactt
ggaaaactaaatcaatcaatgcaagaaatcgatgtttcgcaagctccgtactatgatttg
gtgaaagctgcggtgaatgctttacgagtctaa
DBGET
integrated database retrieval system
