Leucoraja erinaceus (little skate): 129696034 Help Entry 129696034         CDS       T09122                                  Name (RefSeq) collagen alpha-1(IX) chain-like   KO K08131   collagen type IX alpha Organism leri  Leucoraja erinaceus (little skate) Pathway leri04510   Focal adhesion leri04512   ECM-receptor interaction leri04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:leri00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     129696034  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     129696034   09142 Cell motility    04820 Cytoskeleton in muscle cells     129696034  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00535 Proteoglycans [BR:leri00535]     129696034 Proteoglycans [BR:leri00535]  Extracellular matrix (ECM) proteoglycans   Others    129696034 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen Laminin_G_3 Laminin_G_2 Motif Other DBs NCBI-GeneID:  129696034 NCBI-ProteinID:  XP_055489418 LinkDB All DBs Position 4:22478499..22638418 Genome browser AA seq 1005 aa AA seqDB search MVQYIDEYLLNFYRHTVVRQPHPLGSSAPHYLSVSQLPGFSLELGMFRGSRKNQKMFLDK LCIFVFSTFQTAFWSPVLCTVEQRINYNGLDDNTVCPNIRIGQDDLPGFDLITQFQLDSI PLRGVRRVEGSTPLQIAFRLDREANFEIPTRIIYPRGLPEDYSFVTTFRMAKNTVNKVWN VWQIVDENANEQVGLRLNGDTQSLEFYLVSSDSSLQSTVFQGVSQIFDTDWHKILVGVER DTVSLFVDCHHVASQSIKPKGTVDVDGDTLIGRLDTNPEVSVVFELQWMLIHCDPQRAHR ESCAELSIQQPDFDFRPDYGKPSQPGPMGPPGPVGPPGFPGSPGPSGFPGIPGSTGMDGR DGVDGAVGPPGHSGLPGQKGERGDTGFIGRPGKPGIPGINVRSPGLIGPVGGVRGRVGPP GVPGSEGLPGVSKSGNPGPPGENGLDGEPGLPGPPGQPGTNGEPGSPGPPGPIGPPGAAG DGSGEVVCTVSCPTSPPGLPGLPGFKGHKGQKGVAGVVGKEGPKGDRGSPGPQGIRGIPG SEGSRGPRGFPGLSGDKGSKGIPGFNGLSGPPGPLGPTGPEGTRGGIGEPGIKGPKGPEG SRGPYGAPGPKGEPGAPGLAGRDGSPGVDGMKGDAGIPGQMGETGIRGLPGLHGSPGQKG HAGEKGDTGEVGSMGPLGIPGEPGDPGTPGQRGDQGPRGSPGTPGEAGLIGPPGLSGPAG TKGDCGRPGLQGPHGFPGGRGDKGSSGIPGHKGNGGKTGVKGETGRKGEQGIPGVQGRKG EAGTLGGKGQTGSQGPRGRHGLQGPPGPIGARGREGIQGTPGFPGSPGKHGKDASEHRIR EVCMSIIQEQMSQLSASLRQPVMPGQPGRPGPSGPPGPVGPPGVAGHPGAVGPQGIKGHQ GYPGQPGSKGQQGERGEKGVEGIGLRGSPGPQGSPGIVGMPGIGKDGRDGARGEIGLPGE QGHPGPHGLRGFPGICDASSCVGPPHRYMGMGIGKKSMSMKGPSK NT seq 3018 nt NT seq  +upstreamnt  +downstreamnt atggtacagtatatcgatgagtatctcttgaatttctacaggcatactgtagtgcgacaa cctcaccctctcggttcctcggctccccattacctctccgtttcccagttacctggtttc tctttggaattgggaatgtttcgcggatcaaggaagaatcagaagatgtttttggataag ctgtgtattttcgtattttcaacctttcagacagcattttggtctccagtattatgcact gtagaacagagaatcaactacaatggtctggatgacaacactgtatgtcctaatataagg atcggacaagatgacttgccaggatttgatcttatcacccaattccaattggattcaata ccgctgcggggtgtgaggagagtggaaggttccactccactgcagattgctttcagactt gacagagaggccaactttgaaatcccaacgagaataatttacccacggggattgcctgaa gattattcctttgtcaccaccttcaggatggcaaaaaacacagttaacaaagtgtggaac gtgtggcagattgtggacgaaaatgccaatgagcaagttggcctaaggttgaacggggac acgcagtccttggagttttatttagtcagctcggatagtagtttgcaatctactgttttc caaggtgtttcacagatttttgacactgactggcataagatcctagtcggcgtggagagg gacactgtcagcttattcgtggactgtcatcatgttgcatcccagtccatcaaaccaaag ggcactgttgatgtcgatggtgatactctgatcgggcgtctggacacaaacccggaagta tcagtagtgtttgaactacagtggatgttgattcactgtgacccacaacgagcgcaccgt gaatcctgcgctgagctatccatacagcagcctgatttcgatttcagacctgattatgga aaaccaagccagccaggtccaatgggacctccgggtccagtaggacctccaggttttcct gggtcaccaggtccttcaggatttccagggattcctggatcaactgggatggatggaaga gatggagttgatggagcggtgggtcctcctggtcattcaggtcttccaggccagaaagga gaaagaggtgatactggtttcattggacgacccgggaaaccgggcattccaggcattaat gtaaggagtccgggtctaattggaccagtggggggagttagaggccgtgtgggtccgcct ggtgttcctgggtcagaaggtctaccaggggtgtcgaaaagtggaaatccaggaccacct ggtgaaaatggtcttgatggtgaacctggacttcctggaccacctggtcaacctggaaca aatggagaacctggttcacctggacctccaggacctattggcccgccaggtgcagcagga gatggaagtggtgaagttgtgtgtacagtgtcctgtcccacaagcccgcccggactccct gggctacccggatttaagggccataaaggccaaaaaggtgttgctggagttgtgggtaag gagggcccaaagggggatcgtggttctcctgggccacaaggtatcagagggattcctgga tctgagggttctcgcggaccaagaggttttcctggtttatcaggagacaaagggagcaaa ggaattccaggatttaatgggttgtctgggcctccaggcccattagggccaacaggtcct gaaggtacaagaggtggaattggagaaccaggcatcaagggtcccaagggtccagaagga tctcgaggaccatatggtgctccaggacctaaaggtgaacctggtgctccggggctcgct ggccgggatggaagtcctggagttgatggcatgaagggtgatgctggaataccaggccaa atgggagaaactggaattcgaggtttacctggattacatggatcaccaggacagaaaggt cacgccggggaaaagggggatactggtgaggtgggatcgatgggacctcttggaattcca ggggagcctggtgacccaggaacaccaggacaaagaggagaccaaggtccacgtggctct cctggaactcctggagaggctggactcattggacctcctggtttatctggacctgcggga acaaaaggtgactgtggtcgaccagggcttcaaggacctcatggttttccagggggaaga ggagataagggatcttctggcattcctggccataaaggaaatggggggaaaacaggtgtg aaaggtgaaactggacgaaagggtgaacagggaattcctggtgttcaaggcaggaaagga gaggctggcactcttggtggaaaaggccaaaccggttcacaaggacctcgtggacggcat gggcttcagggaccaccaggtccaattggtgctcgaggaagggaaggaatacaaggaact ccggggtttcctggctcaccaggtaaacatggcaaagatgcaagtgaacaccggatcagg gaggtgtgcatgagcataattcaagagcaaatgtctcaactgtctgctagcctaaggcaa ccagtaatgcctggacaaccaggccggcctggaccatctggtcctccaggacctgttgga cctccaggagttgcaggccatccaggtgccgtcggcccacaaggtatcaaaggtcaccaa ggttaccctggtcaaccaggatcaaaaggacaacaaggagaaaggggtgagaagggtgta gaaggtatcggtcttcgcggatcaccaggcccacaaggatcacccggtattgtcggtatg cctggcattggaaaggatggccgtgatggtgcccgtggtgaaattggccttccaggtgaa caaggacatccaggcccacatgggctaagaggatttcctggcatctgtgatgcttcttca tgcgtgggtccacctcatcgctacatgggtatgggaattggcaagaaatctatgagcatg aaagggccgtccaaataa

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