Leucoraja erinaceus (little skate): 129698842
Help
Entry
129698842 CDS
T09122
Name
(RefSeq) sodium channel protein type 2 subunit alpha-like isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
leri04040
]
129698842
Ion channels [BR:
leri04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
129698842
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
IQ
GPHH
ATP-synt_B
Sde182_NH-like
Motif
Other DBs
NCBI-GeneID:
129698842
NCBI-ProteinID:
XP_055494135
LinkDB
All DBs
Position
7:32602881..32730025
Genome browser
AA seq
1858 aa
AA seq
DB search
MLIMCTIMTNCVFMTNHNPPEWTKNVEYTFTGIYTFESLIKILARGFCIDHFTFLRDPWN
WLDFSVIVMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLADVM
ILTVFCLSVFALIGLQLFMGNLKHKCVKWPPLDFDFNAKNSSSGLNGTMTNETQNTFDFG
RYILDKDNYYTLNGSKDALLCGNGSDAGQCPEGYICMKAGRNPNYDYTSFDTFGWAFLSL
FRLMTQDFWENLYQQTLRAAGKTYMIFFVLVIFLGSFYLVNLILAVVAMAYDEQNQATLE
EAEQKEAEFQRMLEQLRRHQEDAQAAAALAAEVEEGSERVGMCEMSYSSSEASKLSSKSA
KERRNRRKKRRQGGEEKDDEKMHKSESEDSGRKGNGFRFSIDRNGLSYENKNSSPHQSLL
SVRGSIFSPRRNSRSSIFSFKARTKDVGSENDFADDEHSTFEDNDSRRGSLFIPRMQGER
RSSNVSQGSRCSRILPVLPVNGKKHSSVDCNGVVSLAGGLSTPTSPIGCLLPEGTHTDAD
HKKRRIRSNQHSMDFLDEPTPRQRALSVASILTNTMEELEESRQKCPPCLYKFANDYLIW
DCHPHWLKVKEIVHLIVMDPFVDLAITICIVLNTLFMAMEHYPMTKNFENVLSNGNLVFT
GIFTGEMIFKIVALDPYYYFQEGWNIFDSIIVSLSLMELGLANVEGLSVLRSFRLLRVFK
LAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKEHVCKIEGRGK
LPRWHMNDFFHSFLIVFRVLCGEWIETMWDCMEVAGQSMCLIVFMMVMVIGNLVLLNLFL
ALLLSSFSADNLAASDDDNEMNNLQIAVGRIQRGADYMKRNVQQLFQRVFVKTKVTEDIK
PLDELQKKKDIYISDHTAVELSKEVDYHKDGNCTTSGIGSSMGKYNVDECDNMSFIHNPS
LTVTVPIAVGESDFENLNTEDFTSESDMEGSKEKLPDSSSSEGSTVDISPPGEGEQPEET
PEESTDPEACFTEGCVRKFPLCYVNIDEGYGKSWWNLRKTCFKIVEHNWFETFIIFMILL
SSGALAFEDIYVEQRKNIKSMLEYADKIFTYIFILEMLLKWVAYGFVKYFTNAWCWLDFL
IVDVSLVSLVANALGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNV
LLVCLIFWLIFSIMGVNLFAGKYYRCINVTDGTLFPIDVVDNMTECLQLKESARWKNLKI
NFDNVGLGYLALLQVATFKGWMDIMYAAIDSRKVKQQPDYECNLYMYFYFVIFIIFGSFF
TLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKIQGT
VFDLVTQQVFDISIMILICLNMVTMMVETDDQSKEMSNILYWINLVFIVLFTCECVLKLI
ALRYYYFTIGWNTFDFVVVILSIVGMFLAKIIEKYFVSPTLFRVIRLARIGRILRLIKGA
KGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKHESGIDDMFNFETFGNS
MICLFQITTSAGWDGLMAPILNSVSPDCDPKKENPGSPIMGDCGNPPVAILFFVSYIIIS
FLIVINMYIAIILENFSVATEESAEPLGEDDFEMFYEVWEKFDSDATQFMEYGRLHDFAD
ALEPPLRVAKPNNIQLIAMDLPMVSGDRIHCLDILFAFTKRVLGESGEMDVLRQQMEERF
MASNPSKISYEPITTTLRRKQEHMSATIIQRAFRRYLIRRTLKRASFMFKEKGKASELLP
GKEEMVIDKFNEISTTDKTDMTPSTTSPPSYDSVTKPERTRDDKEKEDRGKDVREYKK
NT seq
5577 nt
NT seq
+upstream
nt +downstream
nt
atgctcatcatgtgcactattatgaccaattgtgtgtttatgacaaaccataacccacca
gaatggaccaagaatgtagagtatacctttactggtatatacacatttgaatcacttata
aaaatccttgcaaggggcttctgtatcgatcacttcacatttctccgagatccatggaat
tggttagatttcagtgtcattgtcatggcatatgtgacagagtttgtcgacttgggtaat
gtctcagctttgagaacattcagggttctccgagcattgaaaacgatctcagtcattcca
ggtctcaagaccattgtgggtgccctgattcaatcagtgaagaaactggctgatgtgatg
attctgactgtgttttgcttgagcgtatttgcactaataggactacagctgttcatggga
aacttgaaacacaaatgtgtaaagtggccgccactagactttgatttcaatgcaaaaaac
agctcgtcgggcctgaatggcaccatgaccaatgagacccagaacacatttgactttggg
agatacatcttagataaagataattattataccttgaatggatccaaagatgcattgctt
tgtggcaatggctcagatgccggtcaatgtcccgagggttatatatgcatgaaagctgga
aggaaccctaactacgattatacaagttttgacacatttggctgggcattcttatcgttg
tttcgactaatgacacaggacttttgggaaaacctttaccagcagaccttgcgggccgct
ggaaaaacctacatgatcttttttgtgttggtcattttcctgggatcgttttacttggtc
aacttgatcctggctgtggtggccatggcgtacgatgaacagaatcaggccacgctcgag
gaggcagaacaaaaagaagcagaatttcagcgaatgcttgaacaactgagaagacatcag
gaggatgcccaggctgcagcggctctggcagctgaggtagaggagggaagcgagagggtt
ggaatgtgtgaaatgtcatacagttcctctgaggcatcgaagctcagttcaaagagcgcc
aaggagcggagaaacagaaggaagaagcggagacaaggaggcgaggagaaagatgatgag
aagatgcacaaatcggaatcagaagacagcggcagaaagggaaacggatttcggttttcc
attgatcggaacggcctttcgtatgaaaacaaaaactcctccccacatcagtcgctgctc
agtgtccgcggctccatcttctctccccgacggaacagcaggagcagcatcttcagcttc
aaggcccggacgaaggacgtaggctcggagaacgattttgccgacgacgagcacagcacg
ttcgaggacaacgatagtcgccggggctcgctcttcatcccccgcatgcagggtgagcgg
cgcagcagtaatgtcagtcagggcagtcgctgctccaggatcctgcctgtccttcccgtc
aatgggaagaaacacagctcggtggactgtaacggagtggtctcactggccggtggactc
tcgacaccaacctcgcccatcggatgcctactgccagagggcacccacacagatgcagat
cataagaagagaaggattagatctaatcaacattccatggattttctggatgaacccact
ccaaggcagagagctttaagtgtggccagcattctcacaaatactatggaagaactggaa
gaatcgcgacagaaatgtccgccctgtttgtacaagtttgcaaacgactacttgatctgg
gactgccatccgcattggctgaaagtgaaggagattgtccacttgattgtgatggacccc
tttgtggatctggccatcactatctgcatcgtgctcaacaccctgttcatggcgatggaa
cattaccccatgaccaagaactttgaaaatgtgctttccaatggcaacttggtatttact
ggaatcttcactggcgaaatgattttcaaaatcgttgccttggatccttattactacttt
caagaaggatggaatatttttgacagcattattgtgagccttagcctcatggaactgggt
cttgcaaatgtggaaggattatctgtgttgcgatctttccgcttgctcagagtttttaaa
ctggccaagtcttggccgacactgaacatgttgattaagatcattggcaactcagttggc
gctctgggcaacttgaccttggtgttggccatcatagtcttcatcttcgccgtggtcggc
atgcagctctttggtaaaagctacaaggagcatgtctgtaaaatcgagggacgcggcaaa
ctaccgcgctggcacatgaatgacttttttcattcctttctgattgtgttccgagtcttg
tgcggagaatggattgagacaatgtgggactgtatggaggtcgccggacagtcaatgtgt
ctcattgtcttcatgatggtcatggtcattggtaacctcgtgttattgaatctatttttg
gccttgctattgagctcgttcagtgccgataatttagcggcttctgatgatgacaatgag
atgaataacttgcagattgccgtgggcaggatacagaggggcgcggactacatgaagcga
aacgtgcagcaattatttcagagagtcttcgtcaagactaaagtgacagaagatatcaaa
cctctcgatgaattgcagaaaaagaaagatatctacatctctgaccacacggccgttgaa
ctgagcaaagaagtggactatcataaagatgggaattgcactaccagtgggattggcagt
agtatgggcaaatacaatgttgatgaatgtgacaacatgtccttcattcacaatccaagt
ctgactgtcaccgtgccaatagctgtgggggaatcagactttgaaaatctaaacacagaa
gactttaccagtgaatcggacatggaaggaagcaaagagaagttacctgatagcagctca
tcggaaggaagcacggttgacatcagtccacctggggagggagagcagccagaggaaacg
ccggaggaatctaccgatcctgaagcttgcttcacagaagggtgtgtaagaaaattccca
ttatgctatgtcaacatagacgagggctatggcaagtcttggtggaacctccgaaagact
tgcttcaaaatagtggaacacaattggtttgagacattcattatcttcatgattcttctg
agcagcggggcattggcttttgaagatatttatgtcgaacagcggaaaaacatcaaatca
atgcttgaatatgcagataaaatcttcacctatattttcattctggaaatgttgttgaag
tgggtggcgtatggctttgtgaagtatttcacaaatgcatggtgttggctggatttcctc
attgttgatgtgtctttagtgagcctcgtagccaatgccttggggtattcggaacttggg
cccattaagtccctcagaacgctaagagccttgaggcctttgagagcactgtcacgcttt
gaaggcatgagggtggttgtcaatgctctccttggtgccatcccttccatcatgaacgtg
ctgctggtttgcctgatattctggcttatcttcagtatcatgggcgtgaatctgtttgct
ggaaaatattatcgttgtatcaacgtgacggacgggactctattccccattgatgtcgtt
gacaacatgacggaatgccttcaacttaaagagagcgctcggtggaaaaacttaaaaatc
aactttgacaacgttggactcggctaccttgctttactgcaagtggcaacatttaaaggc
tggatggatatcatgtatgctgctattgattcaagaaaagtgaaacagcaaccggactat
gaatgcaacctgtacatgtatttttactttgttattttcatcatttttggatctttcttc
accttgaatctgttcatcggtgtcattattgacaacttcaatcaacagaagaaaaagttt
ggaggtcaagatatttttatgactgaagaacagaagaaatactacaatgcaatgaaaaag
ctgggctccaagaaaccacagaaacctataccaagaccattgaacaagatccaaggcacg
gtgtttgatctggtaacccaacaagtctttgatatcagcatcatgattctcatctgcctg
aacatggtcaccatgatggtagaaactgatgaccagagcaaagagatgagcaacatcttg
tattggatcaacttggtcttcattgttctcttcacatgtgaatgtgtgcttaaactgatc
gcccttcgatattattactttacaataggctggaatacttttgactttgtagtcgttatt
ctttccattgtaggcatgttcttagcaaaaatcattgaaaagtactttgtgtcaccgacg
ttgttccgagtgatccgactggccagaattggtcgtatcttgcgcttgatcaagggggcc
aagggaatccgaacactgctgtttgcgttgatgatgtccctgcctgccttgttcaacatc
ggtctgttacttttcttggtcatgttcatttacgccatatttgggatgtctaattttgcc
tacgtgaagcatgaatctggcattgacgacatgttcaactttgagacctttggaaacagc
atgatctgcctgtttcagatcactacatccgctggttgggatggattaatggctccgatt
ctcaacagtgtatcaccagattgtgacccaaagaaagaaaacccaggcagcccgattatg
ggagactgcggcaatccccctgtcgcaatcttattctttgttagttacatcataatctcg
ttcttgattgtcataaatatgtacattgcaattatcctggagaatttcagtgttgcgaca
gaggagagtgccgaaccactcggcgaagatgactttgagatgttttatgaagtttgggag
aagtttgactcggacgcaactcaatttatggagtacgggcgattgcacgactttgcagat
gccctggagccacctctccgtgtggcaaagcccaacaacatacaactcatagctatggac
ctgcccatggttagcggagatagaattcactgcctggatatcttgtttgcattcacaaag
cgtgtgctgggtgagagcggagagatggatgttctacgacagcagatggaagagcgcttc
atggcatctaatccctccaagatatcctatgagccgattaccaccactctgcgacgtaag
caggaacatatgtctgcgactataattcagagagctttcaggcggtatctgattcggcga
acattgaaacgggcatccttcatgttcaaagagaaaggtaaagcaagtgagctcttaccc
ggcaaagaagagatggtgatagacaaatttaatgaaatctccactacagacaaaactgac
atgacaccttccaccacatcaccaccatcctacgacagtgtaacaaagccagagaggacc
agagatgacaaagagaaagaagacagaggcaaagatgtaagggagtataaaaagtaa
DBGET
integrated database retrieval system
