Leucoraja erinaceus (little skate): 129712040
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Entry
129712040 CDS
T09122
Symbol
pomt1
Name
(RefSeq) protein O-mannosyl-transferase 1
KO
K00728
dolichyl-phosphate-mannose-protein mannosyltransferase [EC:
2.4.1.109
]
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri00514
Other types of O-glycan biosynthesis
leri00515
Mannose type O-glycan biosynthesis
leri01100
Metabolic pathways
Module
leri_M00872
O-glycan biosynthesis, mannose type (core M3)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00515 Mannose type O-glycan biosynthesis
129712040 (pomt1)
00514 Other types of O-glycan biosynthesis
129712040 (pomt1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
leri01003
]
129712040 (pomt1)
Enzymes [BR:
leri01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.109 dolichyl-phosphate-mannose---protein mannosyltransferase
129712040 (pomt1)
Glycosyltransferases [BR:
leri01003
]
O-Glycan biosynthesis
O-linked Man type
129712040 (pomt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMT
PMT_4TMC
MIR
Motif
Other DBs
NCBI-GeneID:
129712040
NCBI-ProteinID:
XP_055516162
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All DBs
Position
31:complement(19233582..19262230)
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AA seq
725 aa
AA seq
DB search
MVDLLKMPIVITVQIDVVLAILTVLGIGSRLWGLQYPRAIVFDEVYYGQFVSLYMKQTFF
IDDSGPPLGHMILALGAYLGGFDGNFAWNRIGAEYTGTVPVWNLRLFPALAGALCISLAY
QIIVELKYSHTSALVAALLIMFENSLITQSRFMLLEPILIFFALLAVLSYLKFYNIQKNS
SFSVKWWSWLFLTGTACAFAVGVKYMGLFTYLLLLAIAGVHTWKLIGDTTLSNVTVFYHI
VARVCALLVLPIILYLGCFYIHLTLLYRSGPHDQIMTSMFQASLEGGLARITQGQPLELA
YGSQITLRNTWSKPVPCWLHSHKNMYPIRYDGGRGSSHQQQVTCYPFKDVNNWWIIKDPG
KQELVVSNPPRSVRHGDIVQLVHGMTARYLNTHDVAAPMSPQWQEISCYVDYNISMPAQN
LWKVEIVNRETENEIWKTILSEVKLLHVNTSAVLKLSGTALPDWGYRQLETVGDKSSKVY
HQNMAWNVEEHRYGKSEEQKERELEFQTPVQMDVSQNMSFMAKFLELQLKMLTLKNEETE
HKYSSSPLDWINMDTNIAYWLHPSTNAQVQLVGNISTWSTATVGILVYTVLFLWHLLRQR
RGICTIPKDSWEHLILAGAVCIGGWAVNYLPFFFMEKTLFLYHYLPGLTFKILLLPIILE
HIHNHVLRSSVSRNTFSAVVLAWISSVYFVYQTFSPLTYGYPALSASQLTALRWKDSWDI
LIRKR
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggttgatttgctgaaaatgccaattgtaatcacagtgcagattgatgtggttttagcc
atccttactgtcctaggaattggaagcagactgtgggggctgcaatatcctcgagctatt
gtgtttgatgaagtttattatggacaatttgtttcattgtacatgaaacaaacgtttttt
attgatgacagtggaccaccccttggccacatgattctggctcttggagcttatctcggt
ggttttgatggaaattttgcttggaatagaattggtgcagaatacacagggactgtccca
gtttggaacttgaggctctttccagctctggctggggctctctgcatctcgctggcatac
cagattatcgtagaactcaagtattctcacacctctgctcttgttgctgccctccttatc
atgtttgaaaactccttaataacccagtcacggtttatgcttctggaacccattctcatt
ttctttgcactgctggcggtcttgtcttatctgaaattctacaatatacagaaaaacagc
tcattttcagtgaagtggtggtcttggcttttcctaactggaacagcatgtgcatttgct
gttggggtaaaatacatgggcttattcacatacttgcttctgttggctattgctggagta
catacatggaagctaattggggatacaacattatcaaatgtcacagtgttttatcacatc
gtggcccgtgtatgtgcacttctagtcctcccaataatcttgtatctgggctgcttctac
atccacctgactttgttgtaccgctctgggccacatgatcaaataatgaccagcatgttc
caagcaagtctggagggggggctggcaaggatcacacagggacaacctcttgaactagcc
tatggttcccagattacgctgaggaatacatggagcaaacctgttccttgctggctccat
tcacacaagaacatgtaccctatcaggtatgatggtggcagaggcagctcccatcagcaa
caagtaacgtgctatccttttaaagatgtgaacaattggtggattataaaggatcctggc
aaacaggagctggttgtcagcaatccgcctcgctcagttcgccatggtgatattgtgcaa
ttggtccatgggatgacagctcgttatcttaacacacatgatgttgcagcgcctatgagt
cctcagtggcaggagatttcttgttatgttgattacaacatttcaatgccagcacagaac
ctgtggaaagtggaaattgtcaatcgagaaactgagaatgaaatatggaaaactatatta
tcagaagtaaagcttttgcatgtaaacacctctgcagtattaaagttaagtggtactgct
ttgcctgattggggctaccgccaactggagactgttggagacaaaagttcgaaggtttat
catcagaacatggcatggaatgttgaagaacaccggtatggaaaaagtgaagaacagaag
gagagagagttggagtttcaaacgccagtacagatggatgtcagccagaacatgagcttc
atggccaaattcctggaattgcaactgaagatgttgacgttgaagaatgaagagactgaa
cacaagtacagctcttcccctctagactggataaacatggacaccaatattgcgtattgg
cttcaccccagcaccaatgcccaggtccagttggttggaaatatttcaacatggtcaaca
gcaacggttggaattcttgtttacacagtactcttcctctggcatctactgagacagcgt
aggggaatctgcactatccccaaagattcctgggagcacttaattctggctggagctgtc
tgcattggaggatgggctgttaattatctccctttcttcttcatggagaaaaccctcttt
ttatatcactacctgcccggtctcacattcaaaatcctcctcctacccatcattcttgag
cacattcacaatcacgtgctcaggtcttctgtctccagaaacacattcagtgctgtggtc
ttagcttggatctcctccgtctactttgtgtatcagacattcagtcctctcacctacggg
tatccagctctctcagcatcacagttaactgcattgcgctggaaagacagctgggacatt
cttatacgtaaacggtag
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