Leucobacter muris: Leucomu_03980
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Entry
Leucomu_03980 CDS
T05802
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
leu
Leucobacter muris
Pathway
leu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
leu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Leucomu_03980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
leu03021
]
Leucomu_03980
03400 DNA repair and recombination proteins [BR:
leu03400
]
Leucomu_03980
Enzymes [BR:
leu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Leucomu_03980
Transcription machinery [BR:
leu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Leucomu_03980
DNA repair and recombination proteins [BR:
leu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Leucomu_03980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
DUF1297
Motif
Other DBs
NCBI-ProteinID:
QAB17191
UniProt:
A0ABX5QDZ2
LinkDB
All DBs
Position
848257..851754
Genome browser
AA seq
1165 aa
AA seq
DB search
MAAARNASSTTQLKNGRNHSRLSFAKISDTLSVPNLLALQLESFDWLVGNDAWKERVTEA
QAEGRDDIALKSGLEEIFDEISPIEDNAGTMQLSFENPILDEQKFTIEECKERGKTYAAP
LYVEAAFYNTETQVLKSQTVYMGDFPIMTDKGTFIINGTERVIVSQLVRSPGVYFERAQE
KTSDKDVFTARVIPSRGAWLEFEVDKRDQVGVRIDRKRKQSVTVFLKALGMTSEEILEEF
AGYESIALTLEKDGILTQEEALKDIYRKQRPGEQVAIEAAKALLDNSYFNPKRYDLAKVG
RYKINRKLGLDAPITDSVLSLEDIVATIKYLVGLHAGTETLPGVRDGQPIDLRLDTDDID
HFGNRRIRAVGELIQNQVRTGLSRMERVVRERMTTQDIEAITPNTLINTRPVLAAIKEFF
GTSQLSQFMDQNNPLAGLTNKRRLSALGPGGLSRDRAGVEVRDVHPSHYGRMCPIETPEG
PNIGLIGALATFARINAFGFIETPYRRIVDGKVTDQVDYLTAHEEDEYLIAQAGAPLTKD
GKFAEKQVLARPRGSEVVLVDSDRVQYMDVSPRQMVSVATSLIPFLEHDDANRALMGANM
QRQAVPLVRSESPVVGTGMEGYAAIDAGDVITAQKSGVIAEVSADFVTIQEDEGGTRSYF
MRKFDRSNQGTNYNHRVIVKAGERIEAGEVIADGPATENGELALGRNLLVAFMSWEGHNF
EDAIILSQNLVKDDTLSSIHIEEYDIDARDTKLGKEEITRDLPNASMEALKDLDERGIIR
IGAEVKQGDILVGKVTPKGETELSAEERLLRAIFNEKSREVRDTSLKVPHGVSGTVTAVK
VFDAENDNDDELGSGVNQRVVVYIAQKRKITEGDKLAGRHGNKGVISKILPVEDMPFLAD
GTPVDVILNPLGIPGRMNFGQVLEIHLGWIAKQGWKVDGNPEWAAKLSKEALEAAPNTKV
ATPVFDGASEAEIAGLLDSTLPTRDGERLIDSSGKTRLFDGRSGEPYPYPISVGYMYILK
LHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYALQELLTVK
SDDILGRVKVYEAIVRGENIPEPGVPESFRVLMKEMQSLCLNVEVLGADGNAVNLRDNDD
EAHRTAEELGINLSSRFETSSVDEI
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
ttggctgctgcgcgcaacgcatcgtcaaccacccaactgaagaacggtcgcaaccactcg
cggctctccttcgccaagatttccgacacgctgtcggtgcccaacctgctggcactgcag
ctcgagagcttcgactggctcgtcggcaacgacgcgtggaaggagcgcgtcaccgaggct
caggccgaggggcgcgacgacatcgcgctgaagagcggtctcgaggagatcttcgacgag
atctctccgatcgaggacaacgccggcaccatgcagctgtcgttcgagaacccgatcctc
gacgagcagaagttcaccatcgaggagtgcaaggagcgcggcaagacctacgccgccccg
ctgtacgtcgaggcggccttctacaacaccgagacccaggtgctgaagagccagacggtc
tacatgggcgatttccccatcatgaccgacaagggcacattcatcatcaacggcaccgag
cgcgtcatcgtctcgcagctcgtgcgcagccccggcgtgtacttcgagcgggcgcaggag
aagaccagcgataaggacgtcttcaccgcccgcgtgatcccgagccgcggcgcgtggctc
gagttcgaggtcgacaagcgcgaccaggtcggcgtgcgcatcgaccgcaagcgcaagcag
tcggtcaccgtgttcctcaaggcgctcggcatgaccagcgaggagatcctcgaggagttc
gccggctacgagtcgatcgcgctcaccctcgagaaggacggcatcctcacccaggaggag
gccctcaaggacatctaccgcaagcagcgtccgggcgagcaggtggcgatcgaggcggcc
aaggccctgctcgacaacagctacttcaacccgaagcgctacgacctcgccaaggtcggc
cgctacaagatcaaccgcaagctcggcctcgacgcgcccatcaccgactcggtgctgtcg
ctcgaggacatcgtcgcgaccatcaagtacctcgtcggcctgcacgcgggcaccgagacg
ctccccggcgttcgcgacggccagccgatcgacctgcgtctcgacaccgacgacatcgac
cacttcggcaaccgtcgcatccgcgccgtgggcgagctcatccagaaccaggtgcgcacc
ggcctcagccgcatggagcgcgtcgtgcgcgagcgcatgaccacgcaggacatcgaggcg
atcaccccgaacaccctgatcaacacgcgccccgtgctcgcggcgatcaaggagttcttc
ggcacctcgcagctgtcgcagttcatggatcagaacaacccgctcgcgggcctgaccaac
aagcgccgcctctcggcgctcggccccggcggcctgtcgcgcgatcgcgcgggcgtcgag
gtgcgagacgtgcacccgtcgcactacggccgcatgtgccccatcgaaacccctgagggc
ccgaacatcggcctgatcggcgcgctcgcgaccttcgcgcgcatcaacgccttcggcttc
atcgagaccccctaccgccgcatcgtcgacggcaaggtcaccgatcaggtcgactacctc
accgcccacgaagaggacgagtacctcatcgcgcaggccggcgccccgctcaccaaggac
ggcaagttcgccgagaagcaggtgctcgcgcgcccccgcggctccgaggtggtgctggtc
gattccgaccgcgtgcagtacatggacgtctcgccgcgccagatggtgtcggtggcgacc
tcgctcatcccgttcctcgagcacgacgacgcgaaccgcgcgctcatgggcgccaacatg
cagcgccaggccgtgccgctcgtgcgcagcgagtcgcccgtcgtcggcaccggtatggag
ggttacgccgcgatcgacgccggtgacgtgatcaccgcgcagaagtccggcgtgatcgcc
gaggtctcggccgacttcgtcaccatccaggaggacgagggcggcacccgcagctacttc
atgcgcaagttcgatcgctcgaaccagggcacgaactacaaccaccgcgtcatcgtgaag
gccggcgagcgcatcgaggccggcgaggtcatcgccgacggccccgccaccgagaacggc
gagctcgcgctcggccgcaacctgctcgtcgcgttcatgtcgtgggagggccacaacttc
gaggacgcgatcatcctcagccagaacctggtgaaggacgacaccctctcctcgatccac
atcgaggagtacgacatcgacgcccgcgacaccaagctcggcaaggaggagatcacccgc
gacctccccaacgccagcatggaggcgctgaaggatctcgacgagcgcggcatcatccgc
atcggcgccgaggtcaagcagggcgacatcctcgtcggcaaggtcacgccgaagggcgag
accgagctgagcgccgaggagcgcctgctccgcgcgatcttcaacgagaagagccgcgag
gtgcgcgacacgtcgctcaaggtgccgcacggcgtctcgggcacggtcaccgccgtcaag
gtgttcgacgccgagaacgacaacgacgacgagctgggctcgggcgtcaaccagcgcgtg
gtcgtgtacatcgcccagaagcgcaagatcaccgagggcgacaagctcgccggccgccac
ggcaacaagggcgtcatctcgaagatcctgccggtcgaggacatgccgttcctcgccgac
ggcacgccggtcgacgtgatcctgaacccgctcggcatccccggccgcatgaacttcggc
caggtgctcgagatccacctcgggtggatcgccaagcagggctggaaggtcgacggcaac
cccgagtgggctgcgaagctctcgaaggaggcactcgaggccgccccgaacacgaaggtc
gccacccccgtgttcgacggcgcgtccgaggccgagatcgcggggctgctcgactcgacg
ctgcccacgcgcgacggcgagcggctcatcgactccagcggcaagacccgtctcttcgac
ggccgctcgggcgagccctacccgtacccgatctcggtcggctacatgtacatcctcaag
ctgcaccacctggtcgacgacaagatccacgcgcgctcgaccggcccctactcgatgatc
acccagcagccgctcggcggtaaggcccagttcggcggccagcgcttcggtgagatggag
gtctgggccctcgaggcgtacggcgcggcctacgcgctgcaggagctgctcacggtcaag
tccgacgacatcctcggccgcgtcaaggtgtacgaggcgatcgttcgcggcgagaacatc
ccggagccgggcgtgcccgagtcgttccgagtgctcatgaaggagatgcagtcgctctgc
ctgaacgtcgaggtgctgggcgccgacggcaacgccgtcaacctgcgcgacaacgacgat
gaggcccaccgcaccgcggaggagctcggcatcaacctgtccagccgcttcgagacctcg
tcggtcgacgagatctga
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integrated database retrieval system
