Leucobacter muris: Leucomu_06435
Help
Entry
Leucomu_06435 CDS
T05802
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
leu
Leucobacter muris
Pathway
leu03030
DNA replication
leu03410
Base excision repair
leu03420
Nucleotide excision repair
leu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
leu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Leucomu_06435 (ligA)
03410 Base excision repair
Leucomu_06435 (ligA)
03420 Nucleotide excision repair
Leucomu_06435 (ligA)
03430 Mismatch repair
Leucomu_06435 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
leu03032
]
Leucomu_06435 (ligA)
03400 DNA repair and recombination proteins [BR:
leu03400
]
Leucomu_06435 (ligA)
Enzymes [BR:
leu01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
Leucomu_06435 (ligA)
DNA replication proteins [BR:
leu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Leucomu_06435 (ligA)
DNA repair and recombination proteins [BR:
leu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
Leucomu_06435 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Leucomu_06435 (ligA)
MMR (mismatch excision repair)
DNA ligase
Leucomu_06435 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Leucomu_06435 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
DNA_ligase_ZBD
BRCT
HHH_5
HHH
PTCB-BRCT
DNA_meth_N
zf-TFIIB
Motif
Other DBs
NCBI-ProteinID:
QAB17604
UniProt:
A0A410H9H1
LinkDB
All DBs
Position
1366171..1368606
Genome browser
AA seq
811 aa
AA seq
DB search
MNENAQIPIDFDEARAEAERLAVEIERLRRAYYSEATSLVSDAEYDEMFHRLEALERAFP
ELAGQDSPTREVGAAVVSAGFPEHEHAERMLSLDNVFSLDEFREWAEKTRAAAGRDVRWL
SELKIDGLAISLAYRRGVLETATTRGDGRVGEDITENVELIPVIPRELHGEGIPDFFEAR
GEVFLSSENFEALNERQHELQAEYAAEQRAKGVPEERISIRYPEFANARNTAAGTLRQRA
EKKSETDLALMRDRLGRLSLYVHGIGAWQHPGIENQSEVYGLLGEWGLPVSPHSRVFDTI
DEVVAFIADRGEHRHDVEHEIDGIVVKVDELDLHAELGETSRAPRWAIAYKYPPEEVHTR
LIDIRVGVGRTGRATPYAVMEPVKVAGSTVRQATLHNQQVVKAKGVLIGDTVVLRKAGDV
IPEVLGAVLELRDGSEVEWQMPERCPECGTPLRPMKEGDIDLRCPNARACPAQVRGRVEH
IGSRGALDVEVLGEITAAALTQPEVPADPPLETEAGLFDLSLEELVPITVVVRDSETGEP
VIDEETGEPRRRSPFQRVLLEYPPEAEGLDPAARRKAGYRKDHRVILPSKDAETFLAELE
KAKTKPLWRLLVALNIRHVGPVAARALAEWFGSLDAVREASVEELSEVDGVGGIIAESLK
EWFEVDWHREIVDRWAAAGVQWSTPGHPSPGAAVAKGGVLAGLTVVATGTLEGFTRDEAK
EAIIQAGGKAASSVSKKTDYVAAGPGAGSKETKARDLGIPVLDAAQFAVLVTEGPAALAQ
DDDEAVTDAEEGTAGAGGTETNGSEASGAGE
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgagaacgcgcagatccccatagactttgatgaggcgcgcgccgaggccgagcgc
ctggccgtcgagatcgagcgcctgcgccgcgcctactactcagaggcgacgagcctcgtc
tccgacgccgagtacgacgagatgttccaccggctcgaagcgctcgaacgggccttcccc
gaactcgcggggcaggacagtcccacgcgcgaggtcggcgccgccgtcgtgtcggccggg
ttccccgagcacgagcacgccgagcgcatgctcagcctcgacaacgtcttctcgctcgac
gagttccgcgagtgggccgagaagacccgcgccgccgccggccgcgacgtgcgctggctc
tccgaattgaagatcgatgggctcgcgatcagcctcgcctaccggcgcggcgtgctcgag
accgcgaccacccgaggcgacggccgggtgggcgaggacatcaccgagaacgtcgagctg
atcccggtgatcccgcgtgaactgcacggcgagggcatccccgacttcttcgaggcccgc
ggcgaggtgttcctcagcagcgagaacttcgaggcgctcaacgagcgtcagcacgagttg
caggccgaatacgccgccgagcagcgcgccaagggcgtgcccgaggagcgcatctcgatc
cgctatcccgagttcgcgaacgcgcggaacaccgccgcgggcaccctgcgccagcgcgcc
gagaagaagagcgagaccgacctggcgctcatgcgcgaccggctcgggcggctctccctg
tacgtgcacggcatcggcgcctggcaacaccccggcattgagaaccagtccgaggtgtac
ggcctgctcggcgagtgggggctgcccgtctcgccccactcgcgcgtcttcgacaccatc
gacgaggtcgtcgcgttcatcgccgaccgcggcgagcaccggcacgacgtcgagcacgag
atcgacggcatcgtggtgaaggtcgacgagcttgacctgcacgccgagctcggcgagacg
agtcgggctccgcgctgggcgatcgcctacaagtacccgcccgaggaggtgcacacccgc
ctcatcgacatccgcgtgggggtcggccgcaccggtcgggcgacgccttacgccgtcatg
gagcccgtgaaggtcgccggatcgacggtgcgccaggccaccctgcacaatcagcaggtc
gtcaaggccaagggggtgctcatcggcgacacggtcgtgctgcgcaaggcgggcgacgtg
atccccgaggtgctcggagccgtgctcgaactgcgcgacggcagcgaggtcgagtggcag
atgcccgagcgctgccccgagtgcggcacccctctgcgccccatgaaagagggcgacatc
gatctgcgctgccccaacgcgcgcgcctgccccgctcaggtgcgcggccgtgtcgagcac
atcgggtcgcggggcgcgctcgacgtcgaggtgctcggcgagatcacggcggctgcgctc
acgcagcccgaggtgcccgccgatccgccgctcgagaccgaggccgggctcttcgacctg
agcctcgaagagctcgtgcccatcaccgtcgtggtgcgcgacagcgagaccggcgagccg
gtgatcgacgaggagacgggcgagccgaggcggcgctcgccgttccagcgcgtgctgctc
gagtacccgcccgaggccgagggactcgatcccgcggcgcggcgcaaggccggctaccgc
aaagaccatcgtgtgatcctgccctcgaaggacgccgagacgttcctcgccgaactcgag
aaggccaagaccaagccgctgtggcggctgctcgtcgccctcaacatcaggcacgtgggc
cccgtggcggcacgggctctcgccgagtggttcggctcgctcgacgcggtccgggaggcg
tcggtcgaagagctctccgaggtcgacggcgtggggggcatcatcgccgaatcgctcaag
gagtggttcgaggtcgactggcaccgcgagatcgtggatcgctgggccgcggccggggtg
cagtggtcgactcccgggcaccccagccccggcgccgcggtcgcgaagggcggggtgctc
gcagggctcaccgtcgtcgcgaccggcacgctcgaggggttcacgcgcgatgaggccaag
gaggcgatcatccaggccggcggcaaggcggcctcgagcgtctcgaagaagaccgactac
gtggcggcgggcccgggggcgggctcgaaggagacgaaggccagggatctcggcatcccc
gtgctcgacgccgcgcagttcgccgtgctcgtcaccgagggcccggcggcgctcgctcag
gacgacgacgaggccgtgactgacgcggaggagggcaccgcgggcgcgggcggcaccgag
acgaacggctcggaggcgagcggcgcgggggagtga
DBGET
integrated database retrieval system
