Legionella fallonii: LFA_2815
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Entry
LFA_2815 CDS
T03771
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase beta chain (Transcriptase beta chain) (RNA polymerase beta subunit)
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
lfa
Legionella fallonii
Pathway
lfa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lfa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LFA_2815 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lfa03021
]
LFA_2815 (rpoB)
03400 DNA repair and recombination proteins [BR:
lfa03400
]
LFA_2815 (rpoB)
Enzymes [BR:
lfa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LFA_2815 (rpoB)
Transcription machinery [BR:
lfa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LFA_2815 (rpoB)
DNA repair and recombination proteins [BR:
lfa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LFA_2815 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
DUF6497
7TMR-HDED
Motif
Other DBs
NCBI-ProteinID:
CEG58181
UniProt:
A0A098G871
LinkDB
All DBs
Position
I:complement(3097293..3101399)
Genome browser
AA seq
1368 aa
AA seq
DB search
MAVAEAKPQYSHAEKKRFRKSFGKQIDQMAIPNLLEIQLKSYRDFLQTDTRLSEQLKTGL
HAAFSSVFPIESFSGNARLEYVGYKLGEPAFDVRECKLRGLTYSAPLRVTIRLVVLDKDA
SDEPKPVKDIREQDVFMGEIPLMTDVGTFVVNGTERVVVSQLHRSPGVIFEHDKGKTHSS
GKLLYSARIIPYRGSWLDFEFDPKDCVYVRIDRRRKLPVSILLRALGYETEDILGEFFEV
TNCHLKNGEYHIDLIPQRLRGEIASFDILVPETGELIVEQGRRITARHIKQMEKAQMQDL
VVPRDYLIGKILAKNVIDTLTGEFLAKANDEITEELLDAMADNGILQIDMIYTNDLDHGS
YISDTLKIDPTSSQLEALVEIYRMMRPGEPPTKEAAEALFKNLFFVDDRYDLSAVGRMKF
NRRVGRKNDDGPGTLIKEDILAVIKTLIDIRNGIGMVDDIDHLGNRRVRSVGEMTENQFR
VGLVRVERAVKERLSLVESENLMPQDLINAKPVSAAIKEFFGSSQLSQFMDQVNPLSGVT
HKRRVSALGPGGLTRERAGFEVRDVHTTHYGRVCPIETPEGPNIGLINSLSVYARTNDYG
FIETPCRRVINGRVTDEIEYLSAIEEVDQYIAQSSVELDEQGNILADLVPCRHQNEFSLT
TPDKINYMDISPKQIVSVAASLIPFLEHDDANRALMGSNMQRQAVPTLRSEKPLVGTGME
RIVASDSGVSVVAKRGGIIDSVDASRIVVRVNDNETTAGETGVDIYNLTKYFRSNQDTCI
NQRPIVSTGDRIQKSDVLADGPCTDMGELALGQNLLVAFMPWNGYNFEDSILISERVVQD
DRFTTIHIEELTCIARDTKLGTEEITADIPNVGESALSNLDESGVVYIGAEVSAGDILVG
KVTPKGETQLTPEEKLLRAIFGEKASDVKDSSLRVPSGMNGTVIDVQVFTRDGLDKDARA
KSIEEEHLARVRKDLIDERRIREEDIYHRVSNLLLDKVANGGPNNLKPGSKITDDYLLKV
ARDKWFDIRLDNDEISQQLEQLSKQLELLTKEMEKRFNDSRKKIIQGDDLAPGVLKIVKV
YLAVKRRIQPGDKMAGRHGNKGVISIVVPIEDMPHMEDGTAVDIVLNPLGVPSRMNIGQV
LETHLGLAAKGLGIKVAQMLDSKQSAEEIRGFLNKIYNHSDIQRVNLDCLNEEELFRLAD
NLRAGVPMATPVFDGASEEEIKQMLQLADLPSDGKTVLIDGRTGNKFDNPVTVGYMYMLK
LNHLVDDKMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVK
SDDVGGRTKIYKNIVDGDHRMDPGMPESFNVLLKEIRALGIDIELDHG
NT seq
4107 nt
NT seq
+upstream
nt +downstream
nt
atggccgttgcagaagctaaacctcaatattcacatgctgagaaaaaacgatttcgcaaa
agctttggtaagcagattgatcaaatggctataccaaatctgcttgaaattcaacttaaa
tcctatagggattttctccagaccgatactcgattaagtgaacaacttaaaactggacta
catgccgcattctcatctgtgtttcctattgaaagtttttctggtaatgcaagacttgaa
tatgtgggatataaactaggtgagcccgcatttgatgtgcgtgaatgtaaactgagaggt
ttaacctactcagcccccttacgggtcacgataagacttgttgttcttgataaagacgca
agcgatgagccaaagccagttaaagacattagagagcaagatgtttttatgggtgagatt
cctttaatgactgatgtcggtacttttgttgtcaatggcactgaaagagtcgttgtatca
cagctgcaccgttctccaggcgttatctttgaacatgataaaggtaaaacgcactcatct
ggaaaactactatattcagcacgtataataccttaccgtggttcatggttagattttgaa
tttgatcccaaagattgtgtttatgtccgtattgatagaagacgtaaattgcctgtgagc
atattattaagagctttaggttacgaaactgaagatattttgggtgaattttttgaagta
acaaattgtcaccttaaaaatggtgaatatcatattgatttaattccacaacgtttacgt
ggagaaatagcttcatttgatattcttgttcctgaaacaggtgaattaattgttgaacaa
ggacgcagaatcactgctagacacattaaacaaatggaaaaagcccaaatgcaggatctc
gtagttcctagagattacttaattgggaaaatattagctaaaaatgtaattgatacatta
accggtgagtttttagcgaaagcaaatgatgaaattactgaagaattattagatgcgatg
gctgataatggaattcttcaaattgatatgatctatactaacgatttagatcacgggtca
tacatttcagatactttaaagattgacccgacgtcaagtcagctcgaggccttggttgaa
atttacagaatgatgcgaccaggtgagccacctacaaaagaagctgcagaagcattattc
aagaatttattctttgttgatgatcgatacgatctatccgctgttggacgaatgaaattt
aacagacgagtaggtagaaagaacgatgatggtcctggtactctgattaaagaagatatc
ctggctgttattaagaccttaattgatattcgaaatggtatcggtatggttgacgatatt
gaccaccttggtaatcgtagggtacgaagtgtcggtgaaatgactgaaaatcagtttaga
gtaggcttggttcgcgtagaacgtgccgttaaagaaagacttagtctagttgagtcagaa
aatttaatgcctcaagatttaatcaatgcaaaaccagtttctgctgcgattaaagagttt
tttggctctagccagctgtctcaattcatggatcaagttaatccattatcaggggtaact
cataagcgaagagtatctgctttaggcccaggcggtttaactcgtgaacgtgctggtttt
gaggtacgcgacgtacatacaactcactatgggcgcgtctgtcctattgaaactcctgaa
ggtcctaacatcggattgattaactctctatccgtttatgctagaaccaatgattatggg
ttcattgagacaccttgccgtagggtaattaatggtcgtgtaaccgatgaaattgaatat
ttgtctgctattgaagaagttgatcaatacatcgctcaatctagtgtagaacttgatgag
cagggcaatattttggctgatttagttccctgtagacatcagaatgagttctcattaacg
actcctgataaaattaattacatggatatttctcctaaacagatcgtttctgttgctgcg
tctttaattccattccttgagcatgatgatgcgaacagggcgctcatgggatcaaacatg
caacgacaagcagttcccacattgcgctctgaaaagccactagttggtaccgggatggaa
cgaattgttgcttctgattctggggtttccgttgttgcaaaacgcggtggaataatagat
tcagttgatgcttcacgtattgtcgttcgtgtaaacgataatgaaacaacagcaggtgaa
acaggggttgatatttataaccttactaaatatttccgctctaaccaagacacgtgtatt
aatcaacgtccaatcgtatctacaggtgatcgtatacaaaaaagtgatgttttagccgat
ggcccctgtactgatatgggagagttagcattaggacaaaatttattagttgcctttatg
ccttggaatggatataactttgaggactctattcttatatcagaacgagttgtccaagat
gataggtttacaactatccatatcgaagaactaacctgtatcgcacgtgacactaaattg
ggaacagaggaaatcaccgcagatattcctaatgttggtgagtctgctttatctaattta
gatgagtcaggtgttgtttacataggtgctgaagtaagtgctggtgatatattggtgggt
aaagtgacgccaaaaggtgaaacacaattaacaccagaggaaaagttactaagggcaata
ttcggtgaaaaggcttctgacgtaaaagactcttcacttcgagttccttcaggaatgaat
ggtacagtaatcgatgtacaagtatttactagagatggcttagataaagatgctcgtgct
aagagtatcgaagaagaacatttagcgagagttcgtaaggatcttattgatgagcgacgt
attcgtgaagaagatatttaccatcgtgtatctaatttacttctagataaggtagcaaat
ggcggacctaataacttaaagccaggctctaagatcactgatgattatttgttaaaagta
gctagagataagtggtttgatatccgtttggataatgatgaaattagtcaacaacttgag
cagttatcaaagcagctcgagcttttaacaaaagaaatggaaaagcgtttcaacgatagc
cgtaaaaaaattatccaaggtgatgatttagcaccaggcgtcttgaaaatcgttaaagtc
tatttagctgtaaaaagaaggatacagcctggtgataaaatggctggtcgacatggtaac
aaaggggttatttccatcgttgttcctattgaagatatgcctcatatggaggatggaacc
gcagttgatatcgtgctcaatccattaggcgtaccatcacgtatgaatatcggacaagtt
ctagagactcatctaggattggctgcaaaaggcctagggattaaagttgcccagatgctt
gatagtaagcaatcggctgaagaaattagagggtttttgaacaaaatatacaatcatagt
gatattcaacgagttaatcttgattgtctcaatgaagaagaactcttcagattggctgac
aatttacgtgcgggcgttcctatggcaacccctgtgtttgatggtgcttctgaagaagaa
atcaagcaaatgctgcagttagcagatttaccctctgatggaaaaacggtactaattgat
ggtcgcacaggaaacaagtttgataatcctgtcacagtcggttacatgtacatgttgaaa
ctaaaccatttagttgatgataaaatgcatgctcgttcaactggctcatatagtttagta
acgcagcaaccactcggcggtaaggcacagtttggtggacagcggtttggggaaatggaa
gtttgggcactagaggcttatggtgcagcatatactctgcaagaaatgctaactgtgaaa
tcagatgacgttggaggtagaacaaagatctacaaaaacatagtcgatggagatcatcgt
atggacccaggaatgcccgagtctttcaatgtactgctgaaggaaattagagcgctggga
attgatatcgagttagatcacggttaa
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integrated database retrieval system
