Laceyella sacchari: C1X05_16335
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Entry
C1X05_16335 CDS
T05304
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
lfb
Laceyella sacchari
Pathway
lfb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lfb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
C1X05_16335 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lfb03021
]
C1X05_16335 (rpoE)
03400 DNA repair and recombination proteins [BR:
lfb03400
]
C1X05_16335 (rpoE)
Transcription machinery [BR:
lfb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
C1X05_16335 (rpoE)
DNA repair and recombination proteins [BR:
lfb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
C1X05_16335 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
PG_binding_4
Motif
Other DBs
NCBI-ProteinID:
AUS10245
LinkDB
All DBs
Position
complement(3298554..3299030)
Genome browser
AA seq
158 aa
AA seq
DB search
MNDNLALEKIKETSMVDLAYDLLKQRGDAMQYRDIMAEVAKKKEFTQEEVEQYIAQLYTE
INIDGRFVCVGRGTWGLREWYSTEQATDSAVAMNVKDDYLDEDMDEDLFEADDEDYGNAG
LDELDDIEVPYADKDTPFDGDEDALPDEDVEDDEEDAL
NT seq
477 nt
NT seq
+upstream
nt +downstream
nt
ttgaatgacaacctcgctttagaaaagatcaaagaaacgtcgatggttgatctagcgtac
gatctgctcaaacaaagaggcgacgcgatgcaatatagagacatcatggcggaagttgcg
aagaaaaaggaatttacccaagaggaagttgaacaatatatcgcgcaattgtatacggaa
atcaatattgacggacgcttcgtttgtgtgggcagaggcacttggggcttgagggaatgg
tattcgaccgagcaggcaaccgattccgctgtggccatgaacgtgaaagacgattattta
gacgaagacatggatgaagacttgtttgaagcggatgacgaggattacggaaatgccggc
ctggatgaattggatgatatcgaggtgccttatgccgacaaagatacgccttttgacggt
gatgaggatgcattgccagacgaagacgtagaagatgacgaggaagacgcgctttaa
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