KEGG   Limosilactobacillus fermentum IFO 3956: LAF_0697
Entry
LAF_0697          CDS       T00699                                 
Name
(GenBank) conserved hypothetical protein
  KO
K15342  CRISP-associated protein Cas1
Organism
lfe  Limosilactobacillus fermentum IFO 3956
Brite
KEGG Orthology (KO) [BR:lfe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lfe03400]
    LAF_0697
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:lfe02048]
    LAF_0697
DNA repair and recombination proteins [BR:lfe03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factor
     LAF_0697
Prokaryotic defense system [BR:lfe02048]
 CRISPR-Cas system
  Universal Cas proteins
   LAF_0697
SSDB
Motif
Pfam: Cas_Cas1
Other DBs
NCBI-ProteinID: BAG27033
UniProt: B2GBK1
LinkDB
Position
813856..814797
AA seq 313 aa
MKKIGADKPKLQELGRIGDRISFLYLEHAVVNRQDSAIKVEDSTGIIYIPVAIIGVLLLG
PGVDVTHRAMELIGDSGAAVLWVGEHGVRQYAHGRALGHSSKLLELQAKLVSNTRTRIAV
ARKMYQKRFPTEDVSQLTMQELRGKEGSRIRRVYREWSKKTGVEWTRREYNHDNFESSTP
INKALTEAHQALYGLCYSVVAALGASPGLGFIHTGHDLAFIYDFADLYKAEFSIPTAFEV
VAAYGDDNIEDRTRWAMRDKIRESKLILKMVADLKDLLGDDDTRNADIINLWDDKEGLQK
FGVQYHEFGDDNS
NT seq 942 nt   +upstreamnt  +downstreamnt
atgaaaaaaataggagctgacaagccgaaactacaagagcttggcagaattggcgatcga
ataagttttttatatttagaacacgcagttgtcaatcgccaagatagtgcgatcaaagtt
gaagacagtactggaatcatatatataccggttgcaattattggtgttttgttattagga
ccgggtgttgatgtgactcatcgtgctatggaattaattggcgattcaggagctgccgtt
ttatgggttggcgagcatggggttcgacaatatgctcatggacgggcactgggacattca
tcaaagttactagaattacaggcaaagttagtttcaaacaccagaaccaggattgcagtt
gctcgtaagatgtatcagaaacggtttccaactgaagacgtttcacagctcactatgcaa
gaacttagaggtaaagagggttctagaatcagacgagtctaccgagaatggtccaagaaa
acaggtgttgaatggactagaagagagtacaatcacgataattttgaatcaagcacaccg
atcaacaaggctttgactgaagctcatcaagcattgtatggattgtgctatagcgtggtc
gctgcattgggtgcttcacctgggcttggctttattcatacgggtcatgatctggctttt
atctatgattttgctgatctatataaagctgagttttcaattccaactgcttttgaagta
gttgccgcatatggggatgataacatagaagatagaaccagatgggcaatgagagataag
attcgtgaaagtaaactgatcttaaaaatggttgccgatttaaaggatcttctcggtgat
gatgatactcgcaatgcagatattattaatctttgggatgataaagaaggattgcaaaaa
tttggtgttcaatatcatgaatttggagatgataattcatga

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