Limosilactobacillus fermentum F-6: LBFF_0016
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Entry
LBFF_0016 CDS
T02669
Name
(GenBank) Sensory box histidine kinase VicK
KO
K07652
two-component system, OmpR family, sensor histidine kinase VicK [EC:
2.7.13.3
]
Organism
lff
Limosilactobacillus fermentum F-6
Pathway
lff02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
lff00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LBFF_0016
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lff01001
]
LBFF_0016
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
lff02022
]
LBFF_0016
Enzymes [BR:
lff01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
LBFF_0016
Protein kinases [BR:
lff01001
]
Histidine kinases
OmpR family
LBFF_0016
Two-component system [BR:
lff02022
]
OmpR family
VicK-VicR (cell wall metabolism)
LBFF_0016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
Cache_WalK
HisKA
HAMP
PAS
PAS_9
PAS_4
HATPase_c_5
PAS_7
PAS_8
Diguanyl_cycl_sensor
Motif
Other DBs
NCBI-ProteinID:
AGL87938
LinkDB
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Position
17284..19143
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AA seq
619 aa
AA seq
DB search
MNSKIKFYQSIHFKIALVFALMLMLTLEVVGAVFVRQLEHQELANFKQQIELPSYIDNSL
ATQLTSTDTKTANKEIKTILARVNNTSITEIRVVDAKGIIRGTSSSGNQGIVGQKTTDTV
IKNTLVNNRSHTENLYDSANHNRYYVSVVPLLASGNANNVVGVVYMRANLEGVYSTINSI
SLIYLSAALITIVLGLGLAVLISREITRPIEEMRKQTLRIARGDFSGQVKVMGNDELGQL
AGAVNNLSVRVEESQESSDAERRRLDSVLSHMSDGVLATDRRGNLTIVNNTALQFLNIAD
EEQVLGKSILDVLKIRRQFSIRHLVDEDQDQVILDDLNEDLILSAYFSPIKRESGFVSGL
VCVLHDVTSQQKEERERKEFVSNVSHELRTPLTSVKSYVEALSDGAINDPELAPRFLGVV
SDETERMIRMINDLLSLSRMDSGTAKLNLEYVNINELFNYILNRFDMIIKNEAADPSQKK
YTIVRYFTKKDLWVEIDTDKFTQVVDNIMNNAVKYSPDGGVITARLLETHNHVILSISDQ
GLGIPRKDLGHIFDRFFRVDKARSRKQGGTGLGLAISKEVVNLLGGQIWVDSVEGKGSTF
YISLPYVPYEEEEWDDQAD
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
gtgaacagtaaaatcaaattctaccagtcgatccactttaaaatcgcccttgtctttgcg
ctgatgctgatgctgacgctcgaagtggtgggggcggtttttgtgcgtcaactggaacac
caagaactcgccaacttcaagcaacaaattgagttgccgtcttacatcgacaattccttg
gccacccaactgaccagcaccgataccaaaacggccaacaaggaaattaaaacgatcctc
gcccgggtcaacaacaccagtatcaccgagatccgggtggtcgatgccaaggggatcatt
cgcgggaccagtagttcgggcaaccaggggatcgtcgggcaaaagaccaccgacacggta
attaaaaacaccctggtcaacaaccgctcccacaccgaaaacctctacgacagcgccaac
cacaaccgctactacgtcagtgtcgtgccgctgttagccagtggcaacgccaataacgtg
gtcggggtcgtttacatgcgggccaacctcgagggggtctattcgacgatcaactcgatc
tccttgatctacctgtcggcggctttgatcacgattgtcctggggctggggttagcggtc
ctaatttcccgggaaattacccggccgattgaagaaatgcgcaagcagaccctacggatt
gcccgtggggacttctccgggcaggttaaggtgatgggcaacgacgaactaggccaactg
gccggggcagtcaacaacctctcggtgcgggtggaggagtcccaagagtcctcggatgcc
gaacggcgccggttggattcagtcctctcccacatgtctgacggggtgttggccaccgac
cgccggggtaacctgacgatcgttaataacaccgccctccagtttttaaacatcgctgac
gaagagcaggtgctcggcaagtcgattttggacgtcttaaagattcggcgccaattctcg
attcgccacctagtcgacgaagaccaagaccaggttatcttggatgatttaaacgaggac
ctgattttatcggcctacttctcgccgattaagcgggaatcgggctttgtctcgggtcta
gtttgcgtcttacatgacgtgacctcccagcaaaaagaggaacgtgaacgtaaggagttc
gtttccaacgtttcccatgaattacggacgccgctgacctcggtcaagtcctatgtggaa
gccctcagtgacggggcgatcaacgacccggaattagccccccgcttcttaggggtggta
tcggatgaaaccgagcggatgatccggatgattaacgacctccttagcctgtcgcggatg
gattcgggaacggctaagttaaacttggagtacgtcaacattaacgagctgtttaactac
attctcaaccgttttgatatgatcatcaaaaacgaggccgcggatccgagccaaaagaag
tacacgattgtccgttacttcaccaaaaaggacctgtgggttgaaatcgacaccgataag
tttacccaggtggtcgataacatcatgaacaacgccgttaagtactcaccggacggcggg
gtcattaccgcccgcctgttggagacccacaaccacgtgatcctgtcgatttctgaccag
gggctggggattccaagaaaggacctcggccacatctttgaccgcttcttccgggttgat
aaggcccgctccagaaagcagggcggtaccgggctgggcttggcgatttcaaaggaagtc
gttaacctgctaggcggccaaatctgggttgattcggttgaaggcaaggggtccaccttc
tacatttccttgccatacgtaccatacgaagaggaggaatgggatgatcaagcagattaa
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