Limosilactobacillus fermentum F-6: LBFF_0169
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Entry
LBFF_0169 CDS
T02669
Name
(GenBank) Exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
lff
Limosilactobacillus fermentum F-6
Pathway
lff03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lff00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LBFF_0169
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lff03400
]
LBFF_0169
Enzymes [BR:
lff01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
LBFF_0169
DNA repair and recombination proteins [BR:
lff03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
LBFF_0169
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
SpoU_sub_bind
Exo_endo_phos_2
Peripla_BP_2
Motif
Other DBs
NCBI-ProteinID:
AGL88090
UniProt:
A0A806IWH0
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Position
192805..193644
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AA seq
279 aa
AA seq
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MRFISWNIDSINAALTGTSARAEETRAVLEKIKAAAPDVIAIQETKLSKSGPTKKHQGVL
AELFAGYTVVWRSSVEPARKGYAGTMYLYKESLTPKVTYPTIGAPEPMDKEGRIITLEFE
NFYLTEVYTPNSGTGLKRLAERQEWDDRYREYLTELDRQKPVIASGDFNVAHEEIDLAHP
ANNHHSAGFTDEEREKFTALLAAGFTDSFRSLHPDETGAYSWWAQRAVTSKVNNSGWRID
YWLVSDRLADQVVSSTMIDSGERRDHAPIQLDINIPAAD
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgcgctttatttcatggaacattgattcaatcaacgctgctttaaccggcacctcggcc
cgggccgaagaaacccgcgccgttttggaaaagatcaaggcggccgctccggacgtgatc
gccattcaagaaaccaagctctccaagagtggaccgactaaaaagcatcagggagttttg
gcggagctgtttgccggttacacggtcgtttggcgctcctcggtcgagccagcgcgcaag
gggtacgctgggacaatgtacctatataaggaaagtttgacccccaaggtgacctaccca
acgattggggccccggagccaatggacaaagaggggcggattatcaccctggaatttgaa
aacttctatttgaccgaggtttacaccccaaactccgggaccggactcaagcgattggcc
gaacggcaagaatgggatgaccgctaccgggagtatttaaccgaactagatcgacaaaag
ccggtgatcgccagtggcgatttcaacgtggcccacgaggaaatcgatttggcgcacccg
gctaataaccaccactcggccggctttaccgatgaggaacgagagaagttcacggccctg
ctggcggccgggtttaccgactcctttaggtccctacacccggacgaaaccggggcttac
tcctggtgggcgcaacgggcggtcaccagtaaggtgaataactccgggtggcggattgac
tactggctagttagcgaccgtttggccgaccaagttgtttcgtcaacgatgatcgattcc
ggtgaacgacgcgaccacgcccccattcaattagatatcaacattccggctgccgattag
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