KEGG   Lactococcus formosensis: LMK00_09620
Entry
LMK00_09620       CDS       T08654                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
lfo  Lactococcus formosensis
Pathway
lfo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lfo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LMK00_09620 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lfo03019]
    LMK00_09620 (rny)
Messenger RNA biogenesis [BR:lfo03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     LMK00_09620 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_PNO1_2nd KH_NusA_2nd KH_KhpA-B
Other DBs
NCBI-ProteinID: USJ20059
UniProt: A0A9Q8Y224
LinkDB
Position
complement(1940155..1941771)
AA seq 538 aa
MNVISLVLLVLLIVLVIAFIFYAQNIKKNKQDAESLFMQAENKANEITANAQRDAALVRK
EAEILRDEAEAFKKEARFNLREEEQKQRREIEDEFKQDRKELKETEQRLKQREEVLDRKD
DKLTNKERSLDSKEEALSKKTDTLNKREQELLEIEEKKQEELERIAALTNEEAKEIILSE
TRDGLTKEMAQLIRSSEEKAHAEADKRAKNIVSLAIQRVSSDSVAEQTVSVVTLPDDGMK
GRIIGREGRNIRTFEALTGIDVIIDDTPEAVVLSGFDPIRREIARMTLEQLVQDGRIHPA
RIEELVEKNRKALDHKMREYGEQAAFEVGAHNLHPDLMKIMGRLHFRTSYGQNVLDHSVE
VANVAGNLAGEMGENVTLAKRAGFLHDIGKALDHEVEGSHVEIGTELARKYKENPIVINT
IASHHGDTEPNSNIATLVAAADALSAARPGARRESIENYIKRLRDLENISTSFDGVESAF
ALQAGREVRVMVKPEKLTDDQIVILARDVKNRIEDEMDYPGNIKVTVIRETRAIDYAK
NT seq 1617 nt   +upstreamnt  +downstreamnt
atgaacgtcatatcactcgttctgcttgtcttattgattgtattggttattgcctttatt
ttttatgcccaaaatattaagaaaaacaagcaagatgctgagagtctttttatgcaggca
gaaaataaggcaaatgagataacggcaaatgcacagcgtgatgctgctcttgtaagaaaa
gaagcggaaatcctgagggacgaagcagaagcattcaagaaagaagcgcgctttaatctt
cgcgaagaagaacaaaagcaacgccgtgaaatcgaagatgaatttaagcaagatcgtaag
gagttaaaagaaactgaacaacgcctaaaacaacgtgaagaagttctagaccgtaaggat
gataaacttacaaataaagaacgtagcttagactctaaagaagaagcactctctaaaaaa
actgatacactcaataaacgtgagcaagaacttttagaaattgaagaaaagaaacaagaa
gaattagaacgtatcgctgctttaacaaatgaagaagctaaagaaatcattcttagtgaa
acccgtgatggtttaacaaaagaaatggcacagcttattcgttcaagcgaagagaaagct
catgctgaagctgataaacgtgccaaaaacattgtttcacttgcaatccaacgtgtctct
agtgattcggttgctgaacaaacagtatcagtagttactttaccagatgatggtatgaag
ggccgaattatcggacgtgaaggtcggaatattcgtacctttgaagctttgacgggtatt
gatgtcattattgatgatactccagaagctgttgtattatctggttttgatccgattaga
cgtgaaattgcacgaatgaccttggagcaactggttcaagatggccgtattcaccctgca
cgtattgaggaacttgtcgagaaaaaccgcaaagcactagatcataagatgcgcgagtat
ggcgaacaagctgcctttgaagtgggagcacataacctccatccagacttaatgaaaatc
atgggtcgcttgcatttccgtacttcttatggtcaaaatgttcttgaccattcagttgag
gtggcaaatgttgccggaaaccttgctggtgaaatgggtgaaaatgtgactctcgctaaa
cgtgctggcttcctacatgatatcggtaaagcattggatcatgaagttgaaggtagccac
gttgagattggtacagaacttgcacgtaagtacaaggaaaatccaattgttattaatacc
attgcaagtcaccatggcgatacagaaccaaacagtaatatcgctactttggttgctgca
gctgatgctttaagtgcagcacgtcctggagcacgtcgtgagtcgattgaaaattatatt
aaacgactccgtgacttagaaaatatctcaacaagttttgatggtgttgaaagtgcattt
gccttacaggcaggacgcgaagttcgtgtcatggttaaaccagagaagcttacggatgat
caaatcgtaattcttgcacgagatgtgaaaaatcgtattgaagatgaaatggattatcca
ggaaatattaaagtcacagttattcgtgaaacacgtgcgattgactacgccaaataa

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